CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.128e-69 Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYKPPSA 396 M G GISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLSLSF NDYPFKPPKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN+QAAQLWSNQEEYRKMVEKLYKPPSA Sbjct: 49 MGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.291e-66 Identity = 120/132 (90.91%), Postives = 124/132 (93.94%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYKPPSA 396 M D GISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLSL+F NDYPFK PKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN+QAAQLWSNQEEYRKMVEKLYKP +A Sbjct: 50 MGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLNA 181
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.297e-49 Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 384 M GISAFP+ DNIF W GTIQG+KDTV+E E+++SL FP DYP+KPP VKFET CFHPNVD GNICLDIL+DKWS Y+VR++L+SIQSLLGEPN SPLNS AA LWSNQ+EY+K+++K Y+ Sbjct: 20 MGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRYQ 147
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.290e-47 Identity = 83/128 (64.84%), Postives = 107/128 (83.59%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 384 MSGD GI+AFP+ DN+F W T+ G KDTV+E +Y+L+L FP+DYP+KPP VKF T C+HPNVD GNICLDIL++ W+++YDVRTILLS+QSLLGEPN +SPLN+QAA +WSNQ EY+K++ + YK Sbjct: 44 MSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEYKKVLHEKYK 171
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.641e-45 Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 381 MSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 44 MSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.641e-45 Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 381 MSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 44 MSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.143e-45 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 384 MSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T CFHPNVD +GNICLDIL+DKWS+ YDVRTILLS+QSLLGEPN SPLN AA+LW NQ Y+K + + Y+ Sbjct: 44 MSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAYKKHLHEQYQ 171
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.656e-45 Identity = 82/128 (64.06%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 384 M+ + GISAFP+ +NIF W GTI G ++TV+ G YRLSL FPN YP+ P VKF T CFHPNVD+ G ICLDIL+DKWS+ YDVRTILLSIQSLLGEPN SPLN+QAA +W++Q+EY+K ++ Y+ Sbjct: 46 MANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQKEYKKYLDAFYE 173
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.775e-45 Identity = 82/127 (64.57%), Postives = 99/127 (77.95%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 381 MSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL++KWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 44 MSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.236e-45 Identity = 82/126 (65.08%), Postives = 98/126 (77.78%), Query Frame = 1 Query: 4 SGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 381 SGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 45 SGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |