CF504087

Overview
NameCF504087
Unique NameCF504087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length273
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13073 contig Csv1_Contig13073:290..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSJ (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. japonica GN=CSLC2 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 9.830e-39
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRI+ALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVK LCE+PESYEAYRK
Sbjct:  396 FFGFNGTAGVWRIQALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYEAYRK 460

HSP 2 Score: 64.3142 bits (155), Expect = 9.830e-39
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            LTR QNINL FHFEVEQQVNGVFL+FFGFNGTA
Sbjct:  371 LTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTA 403
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSI (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. indica GN=CSLC2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.830e-39
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRI+ALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVK LCE+PESYEAYRK
Sbjct:  396 FFGFNGTAGVWRIQALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYEAYRK 460

HSP 2 Score: 64.3142 bits (155), Expect = 9.830e-39
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            LTR QNINL FHFEVEQQVNGVFL+FFGFNGTA
Sbjct:  371 LTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTA 403
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC8_ARATH (Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.832e-38
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALEESGGWLERTTVEDMDIAVRAHL+GWKFI+LNDVK LCEVPESYEAY+K
Sbjct:  390 FFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKK 454

HSP 2 Score: 64.3142 bits (155), Expect = 2.832e-38
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            LTR QNINL FHFEVEQQVNGVFL+FFGFNGTA
Sbjct:  365 LTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTA 397
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC5_ARATH (Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.832e-38
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALEESGGWLERTTVEDMDIAVRAHL+GWKFI+LNDVK LCEVPESYEAY+K
Sbjct:  390 FFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKK 454

HSP 2 Score: 64.3142 bits (155), Expect = 2.832e-38
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            LTR QNINL FHFEVEQQVNGVFL+FFGFNGTA
Sbjct:  365 LTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTA 397
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC4_ARATH (Xyloglucan glycosyltransferase 4 OS=Arabidopsis thaliana GN=CSLC4 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.804e-37
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFI+LNDV+  CE+PESYEAY+K
Sbjct:  362 FFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIYLNDVEVTCELPESYEAYKK 426

HSP 2 Score: 64.3142 bits (155), Expect = 1.804e-37
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            LTR QNINL FHFEVEQQVNGVFL+FFGFNGTA
Sbjct:  337 LTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTA 369
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC3_ORYSJ (Probable xyloglucan glycosyltransferase 3 OS=Oryza sativa subsp. japonica GN=CSLC3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.395e-25
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+SGGW+ERTTVEDMDIAVRAHLNGWKFIFLNDVK LCE+PESY+AYRK
Sbjct:  424 FFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYQAYRK 488

HSP 2 Score: 65.855 bits (159), Expect = 7.507e-11
Identity = 36/47 (76.60%), Postives = 39/47 (82.98%), Query Frame = 2 
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTAWPSGELRPLKSLED 142
            LTR QNINL FHFEVEQQVNGV+LSFFGFNGTA   G  R +K+LED
Sbjct:  399 LTRLQNINLCFHFEVEQQVNGVYLSFFGFNGTA---GVWR-IKALED 441
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSJ (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica GN=CSLC10 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.028e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+SGGW+ERTTVEDMDIAVRAHLNGWKF+FLNDV+  CE+PESYEAYRK
Sbjct:  391 FFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFVFLNDVECQCELPESYEAYRK 455
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSI (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. indica GN=CSLC10 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.028e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+SGGW+ERTTVEDMDIAVRAHLNGWKF+FLNDV+  CE+PESYEAYRK
Sbjct:  391 FFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFVFLNDVECQCELPESYEAYRK 455
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLCC_ARATH (Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana GN=CSLC12 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.518e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+SGGWLERTTVEDMDIAVRAHL+GWKF+FLNDV+  CE+PESYEAYRK
Sbjct:  404 FFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFVFLNDVECQCELPESYEAYRK 468
[Close]
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC7_ORYSJ (Probable xyloglucan glycosyltransferase 7 OS=Oryza sativa subsp. japonica GN=CSLC7 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.006e-23
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 1 
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+SGGW+ERTTVEDMDIAVRAHL GWKF+FLNDV+  CE+PESYEAYRK
Sbjct:  393 FFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLKGWKFVFLNDVECQCELPESYEAYRK 457
The following BLAST results are available for this feature:
BLAST of CF504087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLC2_ORYSJ9.830e-3983.08Probable xyloglucan glycosyltransferase 2 OS=Oryza... [more]
CSLC2_ORYSI9.830e-3983.08Probable xyloglucan glycosyltransferase 2 OS=Oryza... [more]
CSLC8_ARATH2.832e-3881.54Probable xyloglucan glycosyltransferase 8 OS=Arabi... [more]
CSLC5_ARATH2.832e-3881.54Probable xyloglucan glycosyltransferase 5 OS=Arabi... [more]
CSLC4_ARATH1.804e-3778.46Xyloglucan glycosyltransferase 4 OS=Arabidopsis th... [more]
CSLC3_ORYSJ2.395e-2580.00Probable xyloglucan glycosyltransferase 3 OS=Oryza... [more]
CSLCA_ORYSJ2.028e-2476.92Putative xyloglucan glycosyltransferase 10 OS=Oryz... [more]
CSLCA_ORYSI2.028e-2476.92Putative xyloglucan glycosyltransferase 10 OS=Oryz... [more]
CSLCC_ARATH4.518e-2476.92Probable xyloglucan glycosyltransferase 12 OS=Arab... [more]
CSLC7_ORYSJ1.006e-2375.38Probable xyloglucan glycosyltransferase 7 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-575 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504087 ID=CF504087; Name=CF504087; organism=Citrus sinensis; type=EST; length=273bp
GCTGACACGCCCCCAGAACATTAATTTGTCTTTTCATTTCGAGGTGGAAC
AACAGGTTAACGGAGTATTTCTAAGCTTTTTTGGTTTCAACGGAACAGCC
TGGCCGTCTGGAGAATTAAGGCCCTTGAAGAGTCTGGAGGATGGCTTGAA
AGAACAACCGTAGAGGACATGGACATAGCTGTTCGTGCTCATCTCAATGG
TTGGAAATTCATATTCCTTAATGATGTCAAGGGCCTTTGTGAAGTTCCTG
AGTCTTATGAAGCTTATAGAAAG
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