CF504098

Overview
NameCF504098
Unique NameCF504098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:146..462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 7.799e-53
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVP 313
            FVPGLI+LAI+RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV SNGILY PGEHPDHVVVIKYVP
Sbjct:  287 FVPGLIELAIKRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVGSNGILYEPGEHPDHVVVIKYVP 390          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 7.799e-53
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI+RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGILY PGEHPDH+VVIKYVPY
Sbjct:  287 FVPGLIDLAIQRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILYEPGEHPDHIVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.019e-52
Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI+RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.019e-52
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI++N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGILY PGEHPDHVVVIKYVPY
Sbjct:  289 FVPGLIDLAIKKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILYEPGEHPDHVVVIKYVPY 393          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 1.019e-52
Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI+ NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQ FRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQAFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.019e-52
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI+ +CLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIDLAIKNDCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 1.330e-52
Identity = 99/105 (94.29%), Postives = 103/105 (98.10%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLI+LAI +NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.330e-52
Identity = 99/105 (94.29%), Postives = 103/105 (98.10%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLI+LAI +NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.330e-52
Identity = 99/105 (94.29%), Postives = 103/105 (98.10%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLI++AI+RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILY PGEHPDHV+VIKYVPY
Sbjct:  287 FVPGLIEMAIKRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYEPGEHPDHVIVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.269e-52
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI++N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIDLAIKKNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPY 391          
The following BLAST results are available for this feature:
BLAST of CF504098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO3_ARATH7.799e-5396.15Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_SESIN7.799e-5395.24Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_TOBAC1.019e-5296.19Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_MESCR1.019e-5295.24Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_MAIZE1.019e-5295.24Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_HORVU1.019e-5295.24Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO2_ARATH1.330e-5294.29Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_WHEAT1.330e-5294.29Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_SPIPO1.330e-5294.29Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_NICPA2.269e-5295.24Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-586 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504098 ID=CF504098; Name=CF504098; organism=Citrus sinensis; type=EST; length=317bp
CTTTGTACCAGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTG
GTGGAGATGACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTT
GATTTCCTTGTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAA
CCACTTGGGAAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCC
GCTCCAAGGAGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGC
AATGGTATCCTTTATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCAT
CAAGTATGTGCCATATG
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