CF831927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.982e-22 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 T+ +GK+ VER K E+SPL F+Q P QILDAMMPLY+N QILRAL+ES A+E ASRM+AM Sbjct: 278 TSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAM 343 HSP 2 Score: 48.521 bits (114), Expect = 1.982e-22 Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*ALTQ 346 KNL++AYN+ RQAKITGELLEIVAGA AL + Sbjct: 355 KNLTMAYNRARQAKITGELLEIVAGAEALRE 385
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.667e-21 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT EGK+ VER SP+ F+Q P QILDA++PLY+N QILRAL+ES A+E A+RMSAM Sbjct: 252 TTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAM 317 HSP 2 Score: 49.6766 bits (117), Expect = 4.667e-21 Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 KNLS+AYN++RQAKITGE+LEIVAGA AL Sbjct: 329 KNLSIAYNRQRQAKITGEILEIVAGADAL 357
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.463e-20 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT EGK+ VER + SP+ F+Q P QILDA++PLY+N QILRAL+ES A+E A+RMSAM Sbjct: 271 TTKEGKLTVERDIIRTKTTDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAM 336 HSP 2 Score: 46.595 bits (109), Expect = 6.463e-20 Identity = 23/29 (79.31%), Postives = 26/29 (89.66%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 KNLS YN++RQAKITGE+LEIVAGA AL Sbjct: 348 KNLSRVYNRQRQAKITGEILEIVAGADAL 376
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.422e-19 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT EGK+ VER + SP+ F+Q P QILDA++PLY+N QILRAL+ES A+E A+RMSAM Sbjct: 267 TTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAM 332 HSP 2 Score: 44.2838 bits (103), Expect = 1.422e-19 Identity = 20/26 (76.92%), Postives = 25/26 (96.15%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331 K+LS+ YN++RQAKITGE+LEIVAGA Sbjct: 344 KSLSMVYNRKRQAKITGEILEIVAGA 369
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.968e-18 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT EGK+ VER SP+ F+Q PAQILDA++PLY+N QILRAL+ES A+E A+RM+AM Sbjct: 258 TTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQILRALQESLASELAARMTAM 323 HSP 2 Score: 42.3578 bits (98), Expect = 1.968e-18 Identity = 20/26 (76.92%), Postives = 23/26 (88.46%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331 K LS+ YN+ RQAKITGE+LEIVAGA Sbjct: 335 KTLSINYNRARQAKITGEILEIVAGA 360
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.212e-16 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT EGK+ VER + SP+ F+Q P QILDA++PLY+N QILR L+ES A+E A+RMSAM Sbjct: 268 TTKEGKLTVERDVIRSKTVDFSPILQFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAM 333 HSP 2 Score: 35.039 bits (79), Expect = 8.212e-16 Identity = 16/24 (66.67%), Postives = 20/24 (83.33%), Query Frame = 2 Query: 257 NLSLAYNQERQAKITGELLEIVAG 328 +L+ YN+ QAKITGE+LEIVAG Sbjct: 346 DLTRVYNRATQAKITGEILEIVAG 369
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_CHLRE (ATP synthase gamma chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPC PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 8.692e-15 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G+ VER T L P +F+Q PAQILDA++PLYM+ +LR+L+E+ A+E A+RM+AM Sbjct: 251 TTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCLLRSLQEALASELAARMNAM 316 HSP 2 Score: 36.5798 bits (83), Expect = 8.692e-15 Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331 K L++ YN++RQAKIT EL EIV GA Sbjct: 328 KGLTVQYNKQRQAKITQELAEIVGGA 353
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_NOSP7 (ATP synthase gamma chain OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpG PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.134e-14 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT GK VER L+P +F+Q P QILD+++PLY++ Q+LRAL+ES A+E A+RM+AM Sbjct: 209 TTRGGKFEVEREKVASQVRPLAPDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAM 274 HSP 2 Score: 38.1206 bits (87), Expect = 1.134e-14 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*ALT 343 L+L+YN+ RQA IT ELLE+V GA ALT Sbjct: 288 LTLSYNKARQAAITQELLEVVGGAEALT 315
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.134e-14 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G+ VER T L +F+Q P QILD+++PLY++ Q+LRAL+ES A+E A+RM+AM Sbjct: 209 TTRGGQFEVERQTVTTQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAM 274 HSP 2 Score: 41.5874 bits (96), Expect = 1.134e-14 Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*ALT 343 K+LSL+YN+ RQA IT ELLE+V GA ALT Sbjct: 286 KSLSLSYNKARQAAITQELLEVVGGAEALT 315
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.134e-14 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G+ VER T L +F+Q P QILD+++PLY++ Q+LRAL+ES A+E A+RM+AM Sbjct: 209 TTRGGQFQVERQTVTSQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAM 274 HSP 2 Score: 41.5874 bits (96), Expect = 1.134e-14 Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*ALT 343 K+LSL+YN+ RQA IT ELLE+V GA ALT Sbjct: 286 KSLSLSYNKARQAAITQELLEVVGGAEALT 315 The following BLAST results are available for this feature:
BLAST of CF831927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831927 ID=CF831927; Name=CF831927; organism=Citrus sinensis; type=EST; length=502bpback to top |