CF831930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831930 vs. ExPASy Swiss-Prot
Match: RK2_GOSBA (50S ribosomal protein L2, chloroplastic OS=Gossypium barbadense GN=rpl2-A PE=3 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 8.214e-13 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = -1 Query: 126 CWF-KNPAVRGVVMNSIDYLHWGGKGRVSICRKKASTPLG 242 CW K P VRGVVMN +D+ H GG+GR I RKK +TP G Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWG 249 HSP 2 Score: 42.3578 bits (98), Expect = 8.214e-13 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = -2 Query: 65 KRPQPLWGYLAL*RRSRKKNKYNDNLIL 148 K+P WG+ AL RRSRK+NKY+DNLIL Sbjct: 242 KKPATPWGHPALGRRSRKRNKYSDNLIL 269
BLAST of CF831930 vs. ExPASy Swiss-Prot
Match: RK2_PEA (50S ribosomal protein L2, chloroplastic OS=Pisum sativum GN=rpl2 PE=3 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 2.338e-12 Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = -1 Query: 126 KNPAVRGVVMNSIDYLHWGGKGRVSICRKKASTPLG 233 K P VRGVVMN +D+ H GG+GR I RKK STP G Sbjct: 213 KRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWG 248 HSP 2 Score: 42.743 bits (99), Expect = 2.338e-12 Identity = 19/28 (67.86%), Postives = 22/28 (78.57%), Query Frame = -2 Query: 65 KRPQPLWGYLAL*RRSRKKNKYNDNLIL 148 K+P WGY AL RR+RK NKY+DNLIL Sbjct: 241 KKPSTPWGYPALGRRTRKSNKYSDNLIL 268
BLAST of CF831930 vs. ExPASy Swiss-Prot
Match: RK2_JASNU (50S ribosomal protein L2, chloroplastic OS=Jasminum nudiflorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 2.451e-11 Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = -1 Query: 126 KNPAVRGVVMNSIDYLHWGGKGRVSICRKKASTPLG 233 K P VRGVVMN +D+ H GG+GR I RKK +TP G Sbjct: 214 KRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWG 249 HSP 2 Score: 40.4318 bits (93), Expect = 2.451e-11 Identity = 18/28 (64.29%), Postives = 22/28 (78.57%), Query Frame = -2 Query: 65 KRPQPLWGYLAL*RRSRKKNKYNDNLIL 148 K+P WGY AL RSRK+NKY++NLIL Sbjct: 242 KKPTTPWGYPALGSRSRKRNKYSENLIL 269
BLAST of CF831930 vs. ExPASy Swiss-Prot
Match: RK2_EPIVI (50S ribosomal protein L2, plastid OS=Epifagus virginiana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 3.182e-11 Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = -1 Query: 126 KNPAVRGVVMNSIDYLHWGGKGRVSICRKKASTPLG 233 K P VRGVVMN ID+ H GG+GR I RKK +TP G Sbjct: 214 KRPVVRGVVMNPIDHPHGGGEGRAPIGRKKPTTPWG 249 HSP 2 Score: 39.6614 bits (91), Expect = 3.182e-11 Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = -2 Query: 65 KRPQPLWGYLAL*RRSRKKNKYNDNLIL 148 K+P WGY AL RRSRK NKY+DN I+ Sbjct: 242 KKPTTPWGYPALGRRSRKINKYSDNFIV 269 The following BLAST results are available for this feature:
BLAST of CF831930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831930 ID=CF831930; Name=CF831930; organism=Citrus sinensis; type=EST; length=812bpback to top |