CF831988

Overview
NameCF831988
Unique NameCF831988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 450.669 bits (1158), Expect = 3.576e-126
Identity = 219/233 (93.99%), Postives = 229/233 (98.28%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            IWMGKKQETVEDVPCGNTVA+VGLDQ+ITKNATLTNEKE DAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC+IEESGEHI+AGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVL++S RTVMSKSPNKHNRLYMEARP+EEGLAEAID+GRIGPRDDPK RSKIL+EE+GWDKDLAKKIWCFGPETTGPNM VDMCKGVQYLNEIKDSVVA
Sbjct:  434 IWMGKKQETVEDVPCGNTVALVGLDQYITKNATLTNEKESDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSIEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVA 666          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.363e-108
Identity = 194/231 (83.98%), Postives = 212/231 (91.77%), Query Frame = 2
Query:   11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            MG++QE VEDVPCGNTVA+VGLDQFITKNATLT+EK  DAH I+AMKFSVSPVVRVAV+ KVASDLPKLVEGLKRLAKSDPMV CTIEE+GEHI+AGAGELHLEICLKDLQDDFMGGAEI  S+PVVSFRETV+  S   VMSKSPNKHNRLYM+ARP+E+GLAEAID+G+IGPRDDPK RSKILSEEFGWDK+LAKKI  FGP+TTGPNM  D+ KGVQYLNEIKDSVVA
Sbjct:  438 MGRRQEAVEDVPCGNTVALVGLDQFITKNATLTDEKCEDAHTIKAMKFSVSPVVRVAVEPKVASDLPKLVEGLKRLAKSDPMVQCTIEETGEHIIAGAGELHLEICLKDLQDDFMGGAEIRVSEPVVSFRETVIGTSDHVVMSKSPNKHNRLYMQARPMEDGLAEAIDEGKIGPRDDPKVRSKILSEEFGWDKELAKKILAFGPDTTGPNMVTDITKGVQYLNEIKDSVVA 668          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 300.442 bits (768), Expect = 5.977e-81
Identity = 152/233 (65.24%), Postives = 182/233 (78.11%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 5.977e-81
Identity = 152/233 (65.24%), Postives = 182/233 (78.11%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 5.977e-81
Identity = 152/233 (65.24%), Postives = 182/233 (78.11%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 5.977e-81
Identity = 152/233 (65.24%), Postives = 182/233 (78.11%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 298.901 bits (764), Expect = 1.739e-80
Identity = 151/233 (64.81%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 298.516 bits (763), Expect = 2.271e-80
Identity = 151/233 (64.81%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 298.516 bits (763), Expect = 2.271e-80
Identity = 151/233 (64.81%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.271e-80
Identity = 151/233 (64.81%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
EF2_BETVU3.576e-12693.99Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE3.363e-10883.98Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_RAT5.977e-8165.24Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE5.977e-8165.24Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU5.977e-8165.24Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_CRIGR5.977e-8165.24Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_CHICK1.739e-8064.81Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_PONAB2.271e-8064.81Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN2.271e-8064.81Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CALJA2.271e-8064.81Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bp
CCGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGTTCGTTG
ATATGTGTAAGGGAGTTCAATACTTGAATGAAATTAAGGATTCTGTTGTT
GCTG
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