CF832001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832001 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.031e-61 Identity = 117/152 (76.97%), Postives = 128/152 (84.21%), Query Frame = -1 Query: 356 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNSVRRFGKVKYDTLRLPHKVTAQEADGSVKFGTSDGSAYLFDPDIYTDGRISVQGIDGVLFPEEEXXXXXXXXXXXXXXXPRRGKLMEVACRMLGAVGQDSHFTTCQ 811 VLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEESMYNSVRRFGKVK+DTLR PHKV A+EADGSVKFG + SAYLFDPDIYTDGRISVQGIDGVLFP+EE PRRGKL+EVAC MLGA G+D++ + C+ Sbjct: 307 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEEEVVESVKKPVKKIVQPRRGKLLEVACSMLGAFGKDTYLSKCR 458
BLAST of CF832001 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.117e-61 Identity = 119/153 (77.78%), Postives = 128/153 (83.66%), Query Frame = -1 Query: 359 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNSVRRFGKVKYDTLRLPHKVTAQEADGSVKFGTSDGSAYLFDPDIYTDGRISVQGIDGVLFPE--EEXXXXXXXXXXXXXXXPRRGKLMEVACRMLGAVGQDSHFTTC 811 VLTVLAPNDEAM KLTTDQLSEPGAPEQI+YYHIIPEYQTEESMYNSVRRFGKVKY+TLR PHKV A+EADGSVKFG+ D SAYLFDPDIYTDGRISVQGIDGVLFPE EE PRRGKL+EVAC MLGA+G+DS+ + C Sbjct: 310 VLTVLAPNDEAMGKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPDIYTDGRISVQGIDGVLFPEEKEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIGKDSYLSRC 462
BLAST of CF832001 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.150e-59 Identity = 120/154 (77.92%), Postives = 125/154 (81.17%), Query Frame = -1 Query: 356 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNSVRRFGKVKYDTLRLPHKVTAQEADGSVKFGTSDGSAYLFDPDIYTDGRISVQGIDGVLFPEEE--XXXXXXXXXXXXXXXPRRGKLMEVACRMLGAVGQDSHFTTCQ 811 VLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEESMYNSVRRFGK++YD+LR PHKV AQEADGSVKFG DGSAYLFDPDIYTDGRISVQGIDGVLFPEE+ PRRGKLMEVAC MLG S F TCQ Sbjct: 288 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEKTPVEKKTGVPVVKKAPKPRRGKLMEVACTMLG-----SQFPTCQ 436
BLAST of CF832001 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.667e-59 Identity = 119/155 (76.77%), Postives = 124/155 (80.00%), Query Frame = -1 Query: 356 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNSVRRFGKVKYDTLRLPHKVTAQEADGSVKFGTSDGSAYLFDPDIYTDGRISVQGIDGVLFPEEE---XXXXXXXXXXXXXXXPRRGKLMEVACRMLGAVGQDSHFTTCQ 811 VLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYHIIPEYQTEESMYN+VRRFGKVKYD+LR PHKV AQEADGSVKFG DGSAYLFDPDIYTDGRISVQGIDGVLFP+EE RRGKLMEVACRM+G S F CQ Sbjct: 296 VLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPKEETPATEIKPAAPVVKKVSKSRRGKLMEVACRMMG-----SRFIPCQ 445 The following BLAST results are available for this feature:
BLAST of CF832001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832001 ID=CF832001; Name=CF832001; organism=Citrus sinensis; type=EST; length=811bpback to top |