CF832011

Overview
NameCF832011
Unique NameCF832011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:343..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 3.538e-105
Identity = 186/222 (83.78%), Postives = 204/222 (91.89%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMS+T+LVALCQAIDLRHLEENLK TVK TVS VAKK LT+GA+GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPLMQK+RQVLVEHALNNGE+EK  ++SIFQKI AFEEELK VLPKEVE+AR  VE+G+P+IPNRIKECRSYPLY+ VREELG+  LTGEKV SPGE+FDKVFTAMC+GKIIDP+L+CL  WNGA
Sbjct:  190 VNSLGLISSRKTAEAVDILKLMSTTYLVALCQAIDLRHLEENLKSTVKKTVSHVAKKTLTIGANGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKVRQVLVEHALNNGESEKNGSTSIFQKIGAFEEELKAVLPKEVESARDGVESGNPSIPNRIKECRSYPLYKFVREELGTGLLTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGA 411          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 7.376e-103
Identity = 180/222 (81.08%), Postives = 204/222 (91.89%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMS+TFLV LCQA+DLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSR CEKDLLK  D+EHVFAYIDDPCSATYPLMQKLRQVLVEHAL NGE E  + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+P +PNRIKECRSYPLY+ VREELG++ LTGEKV SPGE+FDKVFTA+C GK++DP+LECL+EWNGA
Sbjct:  456 VNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRLCEKDLLKLVDKEHVFAYIDDPCSATYPLMQKLRQVLVEHALVNGERETNSTTSIFQKIRSFEEELKTLLPKEVESARLEVENGNPVVPNRIKECRSYPLYKFVREELGTSLLTGEKVKSPGEDFDKVFTAICAGKLMDPLLECLKEWNGA 677          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.661e-102
Identity = 180/222 (81.08%), Postives = 206/222 (92.79%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGL SSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAYIDDPCSA+ PLMQKLRQVLV+HAL+NG+ EK + +SIFQKI AFE+ELKT+LPKEVE AR  +E+G+  IPNRIKECRSYPLY++VRE++G++ LTGEKV SPGEEFDKVFTAMC+GK+IDPMLECL+EWNGA
Sbjct:  494 VNSLGLNSSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVVDREYVFAYIDDPCSASSPLMQKLRQVLVDHALDNGDREKNSTTSIFQKIGAFEDELKTLLPKEVEIARTELESGNAAIPNRIKECRSYPLYKIVREDIGTSLLTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEWNGA 715          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.661e-102
Identity = 176/222 (79.28%), Postives = 205/222 (92.34%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMSST+LVALCQA+DLRH EENL++TVK+TVSQVAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQVLVEHAL NGE+EK  ++SIFQKI AFEEE+KT+LPKEVE+ R  +ENG+  IPNRIKECRSYPLY+ VREELG+  LTGEKV SPGEEFDKVFTA+C+G++IDP+++CL+EWNGA
Sbjct:  488 VNSLGLISSRKTAEAVDILKLMSSTYLVALCQAVDLRHFEENLRNTVKSTVSQVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGESEKNLSTSIFQKIRAFEEEIKTLLPKEVESTRAAIENGNSAIPNRIKECRSYPLYKFVREELGTELLTGEKVRSPGEEFDKVFTALCKGEMIDPLMDCLKEWNGA 709          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 4.781e-102
Identity = 181/222 (81.53%), Postives = 202/222 (90.99%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENL++TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLRQVLVEHAL NGENEK A++SIFQKI AFEEELK +LPKEV++AR  +++GS  +PNRI ECRSYPLY+ VREELG+ +LTGEKV SPGEE DKVFTA+C+GKIIDP+L+CL  WNGA
Sbjct:  491 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVEHALTNGENEKNASTSIFQKIVAFEEELKVLLPKEVDSARAALDSGSAGVPNRITECRSYPLYKFVREELGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGWNGA 712          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 8.155e-102
Identity = 182/222 (81.98%), Postives = 201/222 (90.54%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAV+ILKLMSSTFLV LCQAIDLRHLEENLK TVKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  D EH+FAYIDDPCS TYPLMQKLRQVLVEHAL NGE EK +++SIFQKI AFEEELKT LPKEVE+AR  +E G+  IPNRIKECRSYPLY+ VREEL ++ LTGEKV SPGEEFDKVF+A+CQGK+IDP+LECLREWNGA
Sbjct:  394 VNSLGLISSRKTAEAVEILKLMSSTFLVGLCQAIDLRHLEENLKSTVKNTVSQVAKRVLTIGVNGELHPSRFCEKDLIKVVDGEHLFAYIDDPCSCTYPLMQKLRQVLVEHALINGEKEKDSSTSIFQKIGAFEEELKTHLPKEVESARIELERGNSAIPNRIKECRSYPLYKFVREELKTSLLTGEKVRSPGEEFDKVFSAICQGKVIDPLLECLREWNGA 615          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 8.155e-102
Identity = 180/222 (81.08%), Postives = 202/222 (90.99%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAV+ILKLMS+TFLV LCQA+DLRHLEENLK TVKNTVSQVAKKVLT+G +GELHPSRFCE DLL+  DRE++FAYIDDPCSATYPLMQKLRQVLVEHAL NGE EK  ++SIFQKIAAFE+ELK +LPKEVE+AR  VE+G+P IPNRIKECRSYPLY+ +REELG+ +LTGEKVTSPGEEFDKVFTAM +G+IIDP+L CL  WNGA
Sbjct:  482 VNSLGLISSRKTAEAVEILKLMSTTFLVGLCQAVDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHPSRFCELDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGETEKNLSTSIFQKIAAFEDELKALLPKEVESARAVVESGNPAIPNRIKECRSYPLYKFIREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGA 703          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 369.007 bits (946), Expect = 1.817e-101
Identity = 180/222 (81.08%), Postives = 198/222 (89.19%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT+EAVDILKLMS+TFLVA+CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE V+ Y DDPCSATYPL+QKLRQV+V+HAL NGE+EK A +SIF KI AFEEELK VLPKEVE AR   +NG+  IPNRIKECRSYPLYR VREELG+  LTGEKVTSPGEEFDKVFTA+C+GKIIDPM+ECL EWNGA
Sbjct:  499 VNSLGLISSRKTSEAVDILKLMSTTFLVAICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYPLIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGA 720          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 368.622 bits (945), Expect = 2.373e-101
Identity = 178/222 (80.18%), Postives = 198/222 (89.19%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT+EAVDILKLMS+TFLV +CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE VF Y+DDPCSATYPLMQ+LRQV+V+HAL+NGE EK A +SIFQKI AFEEELK VLPKEVE AR    NG+  IPNRIKECRSYPLYR VREELG+  LTGEKV SPGEEFDKVFTAMC+GK+IDP+++CL+EWNGA
Sbjct:  491 VNSLGLISSRKTSEAVDILKLMSTTFLVGICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGA 712          
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 4.047e-101
Identity = 180/222 (81.08%), Postives = 200/222 (90.09%), Query Frame = -3
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMS+TFLVALCQAIDLRHLEENLK  VKNTVSQV+K+VLT GA+GELHPSRFCEK+LLK  DRE+VFAY+DDPCSATYPLMQKLRQV V+HAL NGENEK  ++S+FQKI AFEEELK +LPKEVE+AR   ++G+  I N+IKECRSYPLY+ VREELG+  LTGEKV SPGEEFDKVFTAMCQGKIIDPMLECL EWNG+
Sbjct:  489 VNSLGLISSRKTAEAVDILKLMSTTFLVALCQAIDLRHLEENLKSAVKNTVSQVSKRVLTTGANGELHPSRFCEKELLKVVDREYVFAYVDDPCSATYPLMQKLRQVFVDHALENGENEKNFSTSVFQKIEAFEEELKALLPKEVESARAAYDSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSPGEEFDKVFTAMCQGKIIDPMLECLGEWNGS 710          
The following BLAST results are available for this feature:
BLAST of CF832011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PALY_VITVI3.538e-10583.78Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PAL1_POPKI7.376e-10381.08Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PALY_CITLI3.661e-10281.08Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PALY_CAMSI3.661e-10279.28Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL1_PRUAV4.781e-10281.53Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PALY_PERAE8.155e-10281.98Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PAL1_DAUCA8.155e-10281.08Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PAL1_ARATH1.817e-10181.08Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]
PAL2_ARATH2.373e-10180.18Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PALY_POPTR4.047e-10181.08Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832011 ID=CF832011; Name=CF832011; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTACCTTATATGAAAAAACCAATAGAAGTGATCGATTT
ATACAGATGAATTTGTACCACTGACTCGCATGGGCCCTTTTAATGAACAC
AAGAACACAAGGGATTGAAGACCGTGTTATTAAACAAAATAAAAACAACT
AACAAATTGGAAGAGGGGCGCCATTCCATTCCCTGAGACATTCCAGCATT
GGATCAATGATCTTGCCCTGGCACATTGCTGTAAACACTTTGTCAAATTC
CTCGCCGGGCGATGTAACTTTTTCCCCTGTTAGAAAATTAGACCCGAGCT
CCTCCCTCACTAACCTGTACAAAGGGTAAGACCTGCATTCTTTGATCCTG
TTGGGAATTGTTGGACTTCCATTCTCAACAGTCTGCCTGGCGTTCTCAAC
TTCTTTGGGCAAAACGGTTTTCAATTCCTCCTCAAAGGCTGCAATCTTCT
GGAAGATTGAAGAGTTGGCAGTCTTCTCGTTCTCTCCATTGTTCAGTGCG
TGCTCAACAAGTACTTGCCTTAGCTTTTGCATCAATGGATAGGTAGCACT
GCAGGGGTCATCAATGTATGCAAAGACGTGTTCGCGATCAGCCGCTTTGA
GCAGATCCTTCTCACAGAATCTTGATGGATGAAGCTCTCCACTAGCACCG
ACGGTTAAGACTTTCTTAGCTACTTGGCTGACAGTATTCTTGACTGTATG
CTTCAAATTCTCCTCCAAATGTCTCAAATCAATAGCCTGGCAAAGCGCTA
CCAAGAATGTGGAAGACATGAGCTTCAGGATGTCGACTGCTTCAGCAGTC
TTCCTGGAAGAGATCAATCCCAAGGAGTTTACAT
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