CF832015

Overview
NameCF832015
Unique NameCF832015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9630 contig Csv1_Contig9630:826..1522. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +D HCL++LKNCYKS+PE+GKVIV E +LPE P+T+  +++  H+DV+M+  +PGGKERT  EF  LA GAGF G +      N WVMEF K
Sbjct:  263 SDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.459e-23
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCLK LKNCY+++P +GKV+V E +LPE P+TS  +K+  H+D++M+  +PGGKERT  EF  LA GAGF G          WVMEF+K
Sbjct:  268 SDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23
Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCLK LKNCY+++P++GKVIV E +LP  P++S+ +K   H+DV+M+  +PGGKERT+ EF  LA GAGF G        N ++MEF K
Sbjct:  272 SDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22
Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCLK LKNCY ++P++GKVI+ E +LP  P++S+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G +   +  N +V+EF K
Sbjct:  272 SDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCL  LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF +LA GAGF G        N  V+EF K
Sbjct:  271 SDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCLK LKNCY ++P++GKVI+ E +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA G+GF GI       N +V+EF K
Sbjct:  272 SDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCLK LKNCY ++PE GKVIV E +LP  P+ S+ +K   H+D +M+  +PGGKERT  EF  LA GAGF G        N +VMEF K
Sbjct:  277 SDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +D HCLK LKNC++++PE+GKVI+ E +LPE P++++ +++  H+DV+M+  +PGGKERT  EF  LA GAGF G        N W+ME  K
Sbjct:  272 SDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHCL+LLKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+D +M+  +PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  271 SDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21
Identity = 49/92 (53.26%), Postives = 63/92 (68.48%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +D HCLK LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  272 SDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
The following BLAST results are available for this feature:
BLAST of CF832015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_ZINEL8.555e-2455.43Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_CAPAN1.459e-2353.26Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_MEDSA9.459e-2352.17Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_PRUDU3.594e-2251.09Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT2_POPTM8.007e-2253.26Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_ROSCH8.007e-2252.17Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CLABR8.007e-2253.26Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CATRO8.007e-2248.91Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT3_POPKI1.046e-2153.26Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPKI1.366e-2153.26Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832015 ID=CF832015; Name=CF832015; organism=Citrus sinensis; type=EST; length=697bp
TTTTTTTTTTTTTTTTTGCTTATGAAATAATTTTTCCCCATCCTTTATTC
AGACAGCTTTAGGCTTTTTATAAGAGCCCATTGGAAACACGCAATCTACG
CTAGTAACTGCCCTTGGAACAACAAAAGACACCCTAGACAGTAACACATG
AAATACTAGAAATAATAGGAAATATGGGTAACAATATTGCACAAATAGTT
GATAGACCACGTGTCAAGCACCCATTTATTTCAAAGCACTTATTATTAAG
TCCTAGACTCCTCCTCTCAAGCATGGCTATCAGGTACCTGGGAAGTTTGT
CAAATGCATGGGTTCTTGCTCGTCTTTGGGAGACATATCAGCATGCTTGG
AAAGAGATACACGCAAGACAATCAACACAAGATTTGCTTTATTTCTAGGA
TGCATGGGCATGCACTCTACTTATAGAACTCCATAACCCAGAGATTACCA
ATAGCAAGTTCACAACTGATCCCACCAAAACCAGCGCCAGTAGCCAGGGT
CATGAATTCATGCCTTGTTCTCTCCTTTCCACCGGGACTTTGAATCATCA
TAAGCACGTCCAAATGGGAATTTGATTTTGATTCAATGCTTGTATTAGGA
ACTTCTGGAAGCATTGACTCCACAACGATTACCTTTCCATCTTCTGGGAT
GCTTTTGTAGCAATTCTTCAACAACTTCAAGCAATGTTCATCATTCC
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