CF832016

Overview
NameCF832016
Unique NameCF832016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9630 contig Csv1_Contig9630:825..1505. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23
Identity = 50/93 (53.76%), Postives = 67/93 (72.04%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HCL++LKN YKS+P++GKVIV E +LPE P+T+  +++  H+DV+M+  +PGGKERT  EF  LA GAGF G +      N WVMEF K
Sbjct:  262 WSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLK LKN Y+++P +GKV+V E +LPE P+TS  +K+  H+D++M+  +PGGKERT  EF  LA GAGF G          WVMEF+K
Sbjct:  267 WSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLK LKN Y+++P +GKVIV E +LP  P++S+ +K   H+DV+M+  +PGGKERT+ EF  LA GAGF G        N ++MEF K
Sbjct:  271 WSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+DDHC KLLKN Y+++P +GKVI+ E +LPE P+TS+ +++  H+DV+M+  +PGGKERT  EF  LA GAGF       +  N W+ME  K
Sbjct:  258 WSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21
Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLK LKN Y ++P +GKVI+ E +LP  P++S+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G +   +  N +V+EF K
Sbjct:  271 WSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.320e-21
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HC+K LKN Y ++PQ+GKVI+ E +LPE P+T + +K+  H+DV+M+  +PGGKERT  EF  LA  AGF   +      N W+ME  K
Sbjct:  269 WSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21
Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HCLK LKN ++++P++GKVI+ E +LPE P++++ +++  H+DV+M+  +PGGKERT  EF  LA GAGF G        N W+ME  K
Sbjct:  271 WSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLK LKN Y ++P +GKVI+ E +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA G+GF GI       N +V+EF K
Sbjct:  271 WSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCL  LKN Y ++P++GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF +LA GAGF G        N  V+EF K
Sbjct:  270 WSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HCLK LKN Y ++P++GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  271 WSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
The following BLAST results are available for this feature:
BLAST of CF832016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_ZINEL1.841e-2353.76Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_CAPAN2.405e-2351.61Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_MEDSA2.659e-2250.54Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_COFCA5.923e-2250.54Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_PRUDU1.010e-2149.46Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA1.320e-2148.39Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CATRO1.723e-2147.31Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_ROSCH2.251e-2150.54Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT2_POPTM2.940e-2150.54Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPKI2.940e-2151.61Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832016 ID=CF832016; Name=CF832016; organism=Citrus sinensis; type=EST; length=681bp
TGGAATGATGACCATTGCTTGAAGTTGTTGAAGAATAGCTACAAAAGCAT
CCCCCAAGATGGAAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTTC
CTAATACAAGCATTGAATCAAAATCAAATTCCCATTTGGACGTGCTTATG
ATGATTCAAAGTCCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGAC
CCTGGCTACTGGCGCTGGTTTTGGTGGGATCAGTTGTGAACTTGCTATTG
GTAATCTCTGGGTTATGGAGTTCTATAAGTAGAGTGCATGCCCATGCATC
CTAGAAATAAAGCAAATCTTGTGTTGATTGTCTTGCGTGTATCTCTTTCC
AAGCATGCTGATATGTCTCCCAAAGACGAGCAAGAACCCATGCATTTGAC
AAACTTCCCAGGTACCTGATAGCCATGCTTGAGAGGAGGAGTCTAGGACT
TAATAATAAGTGCTTTGAAATAAATGGGTGCTTGACACGTGGTCTATCAA
CTATTTGTGCAATATTGTTACCCATATTTCCTATTATTTCTAGTATTTCA
TGTGTTACTGTCTAGGGTGTCTTTTGTTGTTCCAAGGGCAGTTACTAGCG
TAGATTGCGTGTTTCCAATTGGCTCTTATAAAAAGCCTAAAGCTGTCTGA
ATAAAGGATGCAGAAAAATTATTTCATAAAG
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