CF832069

Overview
NameCF832069
Unique NameCF832069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.960e-57
Identity = 110/176 (62.50%), Postives = 135/176 (76.70%), Query Frame = -3
Query:  273 YAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL--XXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPP 794
            YA++PLDADNLTRWG ALLELSQF+ V++SK++I++A SK EEAL ++P KH  LW LGNAHTS  FLT D+ EAK  F+KA++CFQ+A D +P+N+LY+KSLEV+ KAPELHME+H+HG  QQT+                  SDLKYDIFGWVILAVGIVAWVG A S +PPPP
Sbjct:   24 YAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQTMAAEPSTSTSTKSSKKTKSSDLKYDIFGWVILAVGIVAWVGFAKSNMPPPP 199          
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana GN=TOM20-3 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.097e-47
Identity = 94/179 (52.51%), Postives = 121/179 (67.60%), Query Frame = -3
Query:  267 YAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL---XXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 794
            Y  +PLDADNLTRWG  LLELSQF S+SD+K++I EAI+KFEEAL+IDP K   +W +GNA+TS  FLT D +EAK +FD A++ FQ+AVDE+P N  Y KSLE++ KAP+LH E +K G+  Q +                   SD KYD  GWVILA+G+VAW+  A + +P  P R
Sbjct:   24 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPMGRVEAPAPPSSKAVKNKKSSDAKYDAMGWVILAIGVVAWISFAKANVPVSPPR 202          
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica GN=TOM20 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.318e-45
Identity = 92/176 (52.27%), Postives = 117/176 (66.48%), Query Frame = -3
Query:  267 YAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 794
            Y ++P DADNLTRWG ALLELSQ  +  +S K + +A SK EEAL IDP K   LW LGNA TS GF T+D  +A   F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+   +Q +                 SD  YD+FGWV+L VG+V WVG+A S  PP   R
Sbjct:   26 YEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR 201          
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana GN=TOM20-2 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.936e-45
Identity = 93/188 (49.47%), Postives = 119/188 (63.30%), Query Frame = -3
Query:  267 ANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL----------XXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 800
            A Y  DPLD++NL +WG ALLELSQF+ + ++K ++N+AISK EEAL I+P KH  LW + NA+T+  F   D  EAK  FDKA+E FQRA +E+P N+ Y+KSL+ S KAPELHM+    G+ QQ L                          ++  YD+ GW+ILA GIVAWVGMA S  PPPPAR
Sbjct:   23 AQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLDSSLKAPELHMQFMNQGMGQQILGGGGGGGGGGMASSNVSQSSKKKKRNTEFTYDVCGWIILACGIVAWVGMAKSLGPPPPAR 210          
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.485e-44
Identity = 92/177 (51.98%), Postives = 117/177 (66.10%), Query Frame = -3
Query:  267 YAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT-LXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 794
            Y ++P DADNLTRWG ALLELSQ  +  +S K + +A SK EEAL IDP K   LW LGNA TS GF T+D  +A   F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+   +Q +                  SD  YD+FGWV+L VG+V WVG+A S  PP   R
Sbjct:   26 YEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR 202          
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TO204_ARATH (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana GN=TOM20-4 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.411e-39
Identity = 88/173 (50.87%), Postives = 114/173 (65.90%), Query Frame = -3
Query:  282 ANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIP 800
            A Y K+PLDA+NLTRW  ALLELSQF++  + K++I EAI K  EALVIDP KH  LW +GNAH S GFL++D +EA  +F+KAS+ FQ AV+E+P +ELY+KSL +++KAPELH                             S+ KYD+FGWVILA  +VAW+  ANS+ P
Sbjct:   22 ATYVKNPLDAENLTRWAGALLELSQFQT--EPKQMILEAILKLGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLASKAPELHTG---------GTAGPSSNSAKTMKQKKTSEFKYDVFGWVILASYVVAWISFANSQTP 183          
BLAST of CF832069 vs. ExPASy Swiss-Prot
Match: TO201_ARATH (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana GN=TOM20-1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33
Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = -3
Query:  288 YAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT--LXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSR 794
            Y  +P DADNL RWGEALLELSQF++V DS K+I +AISK E+A++IDP KH  +W LGNA+TS   LT D ++A+ +F  A   F  AV ++P N++Y KSLE++ KAP+LH   HK+ +      +                SD KY + GWVILA+G+VA +     R
Sbjct:   18 YKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGFHKNRLLSLLGGVETLAIPSPKVVKNKKSSDEKYIVMGWVILAIGVVACISFRKLR 188          
The following BLAST results are available for this feature:
BLAST of CF832069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TOM20_SOLTU1.960e-5762.50Mitochondrial import receptor subunit TOM20 OS=Sol... [more]
TO203_ARATH4.097e-4752.51Mitochondrial import receptor subunit TOM20-3 OS=A... [more]
TOM20_ORYSI1.318e-4552.27Probable mitochondrial import receptor subunit TOM... [more]
TO202_ARATH2.936e-4549.47Mitochondrial import receptor subunit TOM20-2 OS=A... [more]
TOM20_ORYSJ2.485e-4451.98Probable mitochondrial import receptor subunit TOM... [more]
TO204_ARATH1.411e-3950.87Mitochondrial import receptor subunit TOM20-4 OS=A... [more]
TO201_ARATH1.157e-3346.20Mitochondrial import receptor subunit TOM20-1 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01E06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832069 ID=CF832069; Name=CF832069; organism=Citrus sinensis; type=EST; length=802bp
TTTTTTTTTTTTTTTAAGGCTAAAAGTAAAAATCATAATTATGCCATTCT
GCCACTATTTTAAGTTAACAAACAAATAGACTGAAACAATGTGTGTCAAA
AGTAATAATCCTACTTAAATGACTGATGGAAAACATTGTGGGGTAAAATC
AACATATGGTAGCATAACACATGCACTAGTCCACAAAACTGATCTCATCC
TCGGAAAATCCTTTGCTAAAATGCCCCAACATGGTTATCTCAAAGAACGA
GCATATGTAAAGCCTATCTTGCAGGAGGTGGTGGAATGCGGGAGTTTGCC
ATTCCAACCCATGCAACAATTCCAACAGCAAGGATTACCCATCCAAATAT
ATCGTACTTTAGATCACTGCTCTTCTTCTTGGAACTCTGTGCATTAGAAG
CAGAAGATCCTCCACCGAGAGTCTGCTGATTAATTCCATGTTTATGGAGC
TCCATGTGCAGTTCCGGTGCCTTAGTACTGACTTCTAAAGATTTCTGATA
GAGCTCATTAGTTGGTTCCTCATCTACTGCTCTTTGGAAACACTCTGACG
CCTTATCAAAATCACCTTTTGCCTCAGAGAGATCGGCAGTCAAAAATCCA
CAAGAGGTGTGAGCATTTCCGAGACTCCATAAAGTATAATGCTTTGCAGG
ATCTATCACTAAAGCCTCCTCAAATTTTGAAATGGCTTCATTTATTATCT
TCTTGGAGTCAGAGACACTTTCAAATTGAGACAATTCAAGCAATGCTTCT
CCCCACCTTGTGAGATTGTCAGCATCGAGAGGGTCTTTGGCGTAATTAGC
TT
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