CF832084

Overview
NameCF832084
Unique NameCF832084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1296 contig Csv1_Contig1296:822..1606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28
Identity = 67/173 (38.73%), Postives = 104/173 (60.12%), Query Frame = -3
Query:  263 PLLDVNGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGR-SFEDGVRRLVL 772
            P+LD +G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC   C+++GR S +DG  RL L
Sbjct:   30 PVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 3.263e-25
Identity = 64/185 (34.59%), Postives = 97/185 (52.43%), Query Frame = -3
Query:  239 SVPEPLLDVNGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAF 784
            S P P+LD++G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:   31 SAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.368e-21
Identity = 65/179 (36.31%), Postives = 94/179 (52.51%), Query Frame = -3
Query:  254 PEPLLDVNGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXGY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFED-GVRRLVLVRD 778
            P+P++D++G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK   CPS   + +  CNNV   F+   +RRL+L  D
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.773e-14
Identity = 57/185 (30.81%), Postives = 88/185 (47.57%), Query Frame = -3
Query:  224 EPLLDVNGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAFPVVLI 775
            E + D+ G  V    +YYIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G ++E G R LVL   D+  F VV +
Sbjct:    4 EKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDDSPFRVVFV 175          
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.857e-12
Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = -3
Query:  221 PLLDVNGNKVESTLKYYIVSAIW-XXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYN---NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAFPVVLIP 772
            P+LD+NG++V +   YY+VSAIW                 C  DVI  P+D+ NG  +T++P      ST+V  ST    RF++  +    C     W +  +D+ASG++F+  G            N FK+E +     +YK+ +C    + C     NVGR  +  +R   L   + P F  V+ P
Sbjct:   42 PVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVIVSPNDLDNGDPITITPATADPESTVVMASTYQTFRFNI--ATNKLCVNNVNWGI-QHDSASGQYFLKAGEF-----VSDNSNQFKIELVDANLNSYKLTYCQFGSDKCY----NVGRFHDHMLRTTRLALSNSP-FVFVIKP 216          
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12
Identity = 57/187 (30.48%), Postives = 86/187 (45.99%), Query Frame = -3
Query:  221 PLLDVNGNKVESTLKYYIVSAIW--XXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAFPVVLIP 772
            P+LD+NG++V +   YYIVSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI    S C+   + C NVGR ++   R   L   + P F  V+ P
Sbjct:   40 PVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKI----SYCQFGTEKCFNVGRYYDPLTRATRLALSNTP-FVFVIKP 213          
BLAST of CF832084 vs. ExPASy Swiss-Prot
Match: SPOR2_IPOBA (Sporamin B OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11
Identity = 56/187 (29.95%), Postives = 86/187 (45.99%), Query Frame = -3
Query:  221 PLLDVNGNKVESTLKYYIVSAIW--XXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAFPVVLIP 772
            P+LD+NG++V +   YY+VSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI    S C+   + C NVGR ++   R   L   + P F  V+ P
Sbjct:   40 PVLDINGDEVRAGENYYMVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKI----SYCQFGTEKCFNVGRYYDPLTRATRLALSNIP-FVFVIKP 213          
The following BLAST results are available for this feature:
BLAST of CF832084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASP_THECC3.153e-2838.7321 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.263e-2534.59Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA6.368e-2136.31Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE5.773e-1430.81Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPOR1_IPOBA1.857e-1229.79Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
SPORB_IPOBA4.137e-1230.48Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR2_IPOBA1.572e-1129.95Sporamin B OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832084 ID=CF832084; Name=CF832084; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTTCAAACAAAGAACACTTGATTTCGACTTTCATAA
GGTATACACCAACAGTAGAATTTATTAACCCCCAAAGGATCACAGGGTTT
CTTATTCATAATTTTAATCCTAGAGATTAAAGAGCAGCTAGCCTGGTCCG
TTATTTAAAATAATAATACCGCTAGCTGGTTAGGGTACATTGATTACACA
GACGTTGATCTTTCTGTAGCGGGAATTAACACAACAGGAAATGCCGGCTC
ATCATCACGAACCAAAACCAGACGTCGAACGCCATCCTCAAACGAACGGC
CAACGTTGTTGCAGTGTTTTACACAAGACTCGCAAACGGATGGACAATGA
ACGATTTTGTATGTACCTGGAAAATTTCCAATTTTCTCAAGCTTAAACCA
ATTTAGCAAAGTTTCAGCTCCAGGATGACCATCAAGTCCCCCGGTTGTTA
TAAACCATTTGCCTGATGCAGCGTCATAATTATCAACTTTCCACAACGGT
TGTTCGTTACAATAGTCACGTCCAGATAGCAACACTGAGAATCTCAAGTT
GAGATCAGTGGATTCTCGGACAATTGTAGAATTGTTATACGGTGACAGTG
TTAATTCGATTCCATTTTGCATATCAGAAGGTAATTGGATAACGTCCAGC
GGACAATATCCGTTTCTGCCACCGTGTAGGCTAACTCCACCACCGCCAGC
TCCCCAGATGGCTGAGACTATGTAGTACTTAAGGGTGGATTCGACCTTGT
TGCCGTTGACATCAAGGAGAGGTTCAGGAACTGATG
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