CF832102

Overview
NameCF832102
Unique NameCF832102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length279
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832102 vs. ExPASy Swiss-Prot
Match: NC2B_ARATH (Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1 
Query:  115 MEPMDIVGKSKEDASLPKATMTRIIKEMLPADGRVARDAQHLLIECCVEIINVVS 279
            M+PMDIVGKSKEDASLPKATMT+IIKEMLP D RVARDAQ LLIECCVE IN+VS
Sbjct:    1 MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS 55
The following BLAST results are available for this feature:
BLAST of CF832102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NC2B_ARATH3.009e-2087.27Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01F03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832102 ID=CF832102; Name=CF832102; organism=Citrus sinensis; type=EST; length=279bp
CCCTTCCACTGAATCGTCCCTCGACTCGGATCTTAACTCGAGTGACTCCT
TTTCTGCATCCTTAGTTGATTCTCTCGATTCTCTGTTCTACTCAGCTCAG
TGACTCTATTAAAGATGGAGCCAATGGATATTGTTGGAAAGTCAAAGGAG
GACGCATCGCTCCCAAAAGCTACAATGACTAGAATTATAAAAGAGATGTT
GCCAGCAGATGGACGTGTTGCAAGAGATGCTCAACATCTTTTGATTGAGT
GTTGTGTAGAGATTATAAATGTTGTTTCC
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