CF832157

Overview
NameCF832157
Unique NameCF832157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5720 contig Csv1_Contig5720:245..1074. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832157 vs. ExPASy Swiss-Prot
Match: ATP7_ARATH (Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At2g21870 PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.210e-78
Identity = 144/195 (73.85%), Postives = 170/195 (87.18%), Query Frame = -2
Query:  243 MLKNIFLDVKKKFETALGVLRKEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERRGLIDEHGAEAMMMDALEKVEKEIKKPLMRNDKKGMALLTAEFDKINKKLGIRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKREEFKDEEMVEVKSLDVRNFL 827
            MLK +F D+K KF+ A+ +LRKEKIT+ PEDPAAV QYANVMKT+R+KAD+FSESQRI + I+T T  IPDAR YLL L+EIR RRGL DE GAEAMM +ALEKVEK+IKKPL+R+DKKGM LL AEF+K NKKLGIRKEDLPKYEE LEL +AKAQL+ELK DA+EAME+QKK+EEF+DEEM +VKSLD+RNF+
Sbjct:   46 MLKGVFFDIKNKFQAAVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAYLLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKLGIRKEDLPKYEENLELSMAKAQLDELKSDAVEAMESQKKKEEFQDEEMPDVKSLDIRNFI 240          
The following BLAST results are available for this feature:
BLAST of CF832157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP7_ARATH6.210e-7873.85Probable ATP synthase 24 kDa subunit, mitochondria... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01G13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832157 ID=CF832157; Name=CF832157; organism=Citrus sinensis; type=EST; length=828bp
TTTTTTTTTTTTTTTTTAAGCGCAATGGGAATACGATCCATTAAACACTT
TAAAACTGGCTAATAACACAGGATGAAAGGTGCCGACTGTGTGATTTCAT
TGCACAAACAGTGATAAACGGAATTCCAGTTCTCTCATGGTCTCTTATTC
TTAAAATCGGGAGCAATGATGGTATTTTCCACATTCCAAGTTGCTGATTT
CCATTATGCTCAAAAACCGTAAAAAGTAAATGCAGAGACTCAAAGGAAGT
TTCTGACATCCAAGGACTTCACTTCGACCATTTCCTCATCCTTGAATTCC
TCTCTCTTCTTTTGTGTTTCCATGGCCTCAAGAGCATCCTTCTTCAATTC
TTCCAACTGTGCTTTGGCAATTTTGAGTTCCAACTGTTCTTCATACTTTG
GTAGATCCTCCTTTCGGATCCCAAGCTTCTTATTAATCTTGTCAAACTCA
GCTGTAAGAAGAGCCATCCCCTTCTTATCATTCCTCATAAGAGGCTTTTT
AATTTCTTTTTCAACTTTCTCCAATGCATCCATCATCATAGCCTCAGCAC
CATGCTCATCAATGAGACCTCTCCTCTCCCTTATTTCCTTGAGCGTCAAC
AAATATGTTCGAGCATCTGGAATTCCTGCTGTTCGTGTTTCAATGGTATA
CGCTATTCGTTGGGATTCTGAGAACAAGTCTGCCTTCTCTCTGACAGTCT
TCATGACATTAGCATACTGAGAAACAGCAGCAGGATCCTCTGGAGCAATG
GTGATCTTCTCCTTCCGGAGTACCCCCAAGGCAGTCTCAAATTTCTTCTT
AACATCCAAAAAGATGTTTTTCAACATC
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