CF832204

Overview
NameCF832204
Unique NameCF832204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:240..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.627e-42
Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HVS I++YR KI+ +LSKICDGIL+LLESHLIPSAS+AESKVFYL M GDYHRYLAEFKTGAERKEAAE+T
Sbjct:   54 YKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENT 153          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.055e-41
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ IR+YRSKI+N+LSKICDGIL LL+S LIPSA+S +SKVFYL M GDYHRYLAEFKTGAERKEAAEST
Sbjct:   56 YKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDSKLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAEST 155          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.800e-41
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HVS I++YR KI+ +LSKICDGIL+LLESHLIP AS+AESKVFYL M GDYHRYLAEFKTGAERKEAAE+T
Sbjct:   53 YKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENT 152          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.351e-41
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ IR+YRSKI+N+LSKICDGIL LL++ LIPSA+S +SKVFYL M GDYHRYLAEFKTGAERKEAAEST
Sbjct:   55 YKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAEST 154          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG + HVS I+DYR KI+ +LSKICDGIL+LL+SHL+P+AS AESKVFYL M GDYHRYLAEFKTGAERKEAAEST
Sbjct:   52 YKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAEST 151          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.237e-41
Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ I++YRSKI+ DLSKICDGILSLLES+LIPSAS+AESKVF+L M GDYHRYLAEFKTG ERKEAAE+T
Sbjct:   53 YKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENT 152          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 8.934e-41
Identity = 82/100 (82.00%), Postives = 90/100 (90.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKE+SRG   HVS I+DYR KI+ +LSKICDGIL+LLE+HLIP+AS AESKVFYL M GDYHRYLAEFKTGAERKEAAEST
Sbjct:   54 YKNVIGARRASWRIISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGILNLLEAHLIPAASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAEST 153          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.934e-41
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGA-ERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HVS I++YR KI+ +LSKICDGILSLLESHL+PSAS+AESKVFYL M GDYHRYLAEFKTGA ERKEAAE+T
Sbjct:   51 YKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENT 151          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.167e-40
Identity = 82/100 (82.00%), Postives = 90/100 (90.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ IRDYRSKI+++LS ICDGIL LL++ LIPSASS +SKVFYL M GDYHRYLAEFKTGAERKEAAEST
Sbjct:   55 YKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAEST 154          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.167e-40
Identity = 81/100 (81.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEES+G E HV+ I+DYR KI+++LSKICDGIL++LE+HLIPSAS AESKVFYL M GDYHRYLAEFK GAERKEAAEST
Sbjct:   51 YKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAEST 150          
The following BLAST results are available for this feature:
BLAST of CF832204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433_MESCR3.627e-4284.0014-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14333_SOLLC1.055e-4183.0014-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]
1433E_TOBAC1.800e-4183.0014-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433C_TOBAC2.351e-4182.0014-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14337_ARATH3.070e-4182.0014-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14334_SOLLC5.237e-4183.0014-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14335_ARATH8.934e-4182.0014-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14331_SOLTU8.934e-4183.1714-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
1433_PEA1.167e-4082.0014-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
14333_ARATH1.167e-4081.0014-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832204 ID=CF832204; Name=CF832204; organism=Citrus sinensis; type=EST; length=346bp
GTTCCTTTGCTACCGTGGAGGAAAGGAACCTTCTCTCACTTGCTTCACAA
GAATGTGATTGGGGCCATGAGGGCTTCATGGAGGATCATCTCTTCCATTG
AGCAGAAGGAGGAGAGCCGGGGAACTGAATACCATGTCTCAGGAATTAGG
GACTACAGGAGCAAAATTGACAATGACCTCAGCAAGATCTGTGATGGGAT
TCTTAGCCTCCTTGAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAATATGAGCGGTGATTACCACAGGTATCTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTT
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