CF832249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 7.067e-69 Identity = 127/176 (72.16%), Postives = 148/176 (84.09%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 844 RGRLYEY+NNSVK TI+RYKKA D+ NT S+ EANAQFYQQEA+KLR +IS++Q +NRNM+GESL L ++LK +ET+LEKGISRIRSKKNELLFAEIEYMQK+E+DLHN+NQ LRAKIAENER QQ+MNLM G S YE+ Q FD R+Y Q+N LQP NHY RQDQ ALQLV Sbjct: 67 RGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTALQLV 242
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.508e-68 Identity = 128/177 (72.32%), Postives = 152/177 (85.88%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 844 RGRLYEY+NNSVK+TI+RYKKA +D+SNTGSI EANAQ+YQQEA+KLR QI N+QN NRN LGESL+ LN ++L+N+E ++EKGIS+IR+KKNELLFAEIEYMQKRE+DLHN+NQ LRAKIAE ER QQ MNLM G SSY+++ Q FD+R+Y QVN LQ NHYPRQDQ LQLV Sbjct: 67 RGRLYEYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQ-MNLMPGSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQDQPPLQLV 242
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.969e-67 Identity = 129/182 (70.88%), Postives = 152/182 (83.52%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERG-----QQNMNLMQGGSSYEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 844 RGRLYEY+NNSVK+TI+RYKKA +D+SNTGSI EANAQ+YQQEA+KLR QI N+QN NRNMLGESL+ L+ ++LKN+E ++EKGIS+IRSKKNELLFAEIEYMQKRE+DLHN+NQ LRAKIAE ER QQ MNLM G SSYE++ FD+R+Y QVN LQ NHY RQDQ +LQLV Sbjct: 67 RGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQDQPSLQLV 248
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.128e-66 Identity = 129/182 (70.88%), Postives = 152/182 (83.52%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQ---QNMNLMQGGSS--YEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 844 RGRLYEY+NNSVK+TI+RYKKA +D+SNTGS+ EANAQ+YQQEA+KLR QI N+ N NRNM+GE+L+G+ KELKN+E R+EKGIS+IRSKKNELLFAEIEYMQKREVDLHN+NQ LRAKIAE ER Q Q MNLM G SS +E++ Q FD+R+Y QVN LQ NHYPRQDQ +QLV Sbjct: 67 RGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQDQPPIQLV 248
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 1.379e-64 Identity = 126/186 (67.74%), Postives = 153/186 (82.26%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII------QSQPFDSRSYFQVNALQPTNHY----PRQDQMALQLV 844 RGRLYEYSNNSVK TI+RYKKA +D SNTGS+ E NAQ+YQQE+AKLR QI ++QNSNR ++GE++ ++ KEL+N+E RLE+ I+RIRSKKNELLF+EI+YMQKREVDLHN NQ+LRAKIAENER +++LM GGS+YE + QSQPFDSR+YFQV ALQP NH+ RQDQ ALQLV Sbjct: 67 RGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV 252
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.801e-64 Identity = 126/186 (67.74%), Postives = 152/186 (81.72%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII------QSQPFDSRSYFQVNALQPTNHY----PRQDQMALQLV 844 RGRLYEYSNNSVK TI+RYKKA +D SNTGS+ E NAQ+YQQE+AKLR QI ++QNSNR ++GE++ ++ KEL+N+E RL++ ++RIRSKKNELLFAEI+YMQKREVDLHN NQLLRAKIAENER +M+LM GGS+YE I Q QPFDSR+YFQV ALQP NH+ R+DQ ALQLV Sbjct: 67 RGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGREDQTALQLV 252
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.163e-53 Identity = 99/173 (57.23%), Postives = 140/173 (80.92%), Query Frame = -3 Query: 335 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSN-RNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSS--YEIIQSQPFDSRSYFQVNALQPTNHYPRQDQ 844 RGRLYEY+NNSVKST++RYKKA +DTSN+G++ E NAQ YQQE++KLR QIS++QN+N R ++G+S++ ++ ++LK +E RLEKGI++IR++KNELL+AE+EYMQKREV+L N N LR+K+ ENERGQQ +N+M S+ Y+ + + P+DSR++ QVN +Q HY Q Q Sbjct: 51 RGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQ 223
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.850e-52 Identity = 111/184 (60.33%), Postives = 138/184 (75.00%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER---GQQNMNLMQGGSSYEI-----IQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 844 RGRLYEY+NNSV+ TI+RYKKA +D N S+ EAN Q+YQQEA+KLR QI ++QNSNR+++GESL LNFKELKN+E RLEKGISR+RSKKNELL AEIEYMQKRE++L ++N LRAKIAE R QQ +++QG + YE QSQ + +R+Y VN L+P + QDQ LQLV Sbjct: 66 RGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQHY-NRNYIPVNLLEPNQQFSGQDQPPLQLV 248
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.308e-50 Identity = 93/170 (54.71%), Postives = 131/170 (77.06%), Query Frame = -3 Query: 338 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQ-PFDSRSYFQVNALQPTNHYPRQD 844 RGRLYEYSNNSVK TI+RYKKA +DTSN ++ E NAQ YQQEAAKL+ QI+N+QNSNR ++G++++ +N +ELK +E RL+KG+ +IR++KNELL AEIEYMQ+RE +L N N L++K+AE+ERG Q +N+M S+ E +Q+ +D R++ Q N + +YP Q+ Sbjct: 93 RGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQE 262
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.124e-49 Identity = 104/181 (57.46%), Postives = 131/181 (72.38%), Query Frame = -3 Query: 317 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE-RGQQNMNLMQGGSSYEIIQSQPFDS----RSYFQVNALQPTNHYPRQDQMALQLV 844 RGRLYEY+NNSV+ TI+RYKKA +D N +I EAN Q+YQQEA+KLR QI ++QN NR++LGESL LNFKELKN+E+RLEKGISR+RSKK+E+L AEIEYMQKRE++L N N LR+KI E QQ +++ G+ YE + S R+Y VN L+P + QDQ LQLV Sbjct: 66 RGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQDQPPLQLV 246 The following BLAST results are available for this feature:
BLAST of CF832249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832249 ID=CF832249; Name=CF832249; organism=Citrus sinensis; type=EST; length=846bpback to top |