CF832283

Overview
NameCF832283
Unique NameCF832283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8502 contig Csv1_Contig8502:628..1133. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK1_ARATH (Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 3.139e-70
Identity = 129/167 (77.25%), Postives = 144/167 (86.23%), Query Frame = 1
Query:    4 VEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            VEPCRSAHL+AM+ AKEAGALLSYDPNLR PLWPS EEA+ QIMSIWDKAE+IKVSDVELEFLTGS+KIDDE+AL+LWHPNLKLLLVTLGE GCRYYTK+F+GAVD FHVN V               ++VDD+SVLEDE RLR++L+FANACGAITTTKKGAIPAL
Sbjct:  146 VEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQIMSIWDKAEIIKVSDVELEFLTGSNKIDDETALTLWHPNLKLLLVTLGEKGCRYYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKGAIPAL 312          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK4_ARATH (Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.319e-68
Identity = 128/167 (76.65%), Postives = 142/167 (85.03%), Query Frame = 1
Query:    4 VEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            VEPCRSAHL+AM+ AKEAGALLSYDPNLRLPLWPS EEA++QI+SIWDKAEVIKVSD EL FLTGSDK+DDE+ALSLWH NLKLLLVTLGE GCRYYTKSFRG+VD FHV+ V               K+VDD++VLEDE RLRE+L+ ANACGAITTTKKGAIPAL
Sbjct:  147 VEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQKQILSIWDKAEVIKVSDEELMFLTGSDKVDDETALSLWHSNLKLLLVTLGEKGCRYYTKSFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKKGAIPAL 313          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK2_ARATH (Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 3.837e-68
Identity = 123/166 (74.10%), Postives = 142/166 (85.54%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAH++AM+ AKEAGALLSYDPNLR PLWPSPEEAR+QIMSIWDKA++IKVSDVELEFLTG+  IDDE+A+SLWHPNLKLLLVTLGE+GCRYYTK F G+V+ FHV+ V               ++VDDQSVLE+E RLR++L+FANACGAITTTKKGAIPAL
Sbjct:  149 EPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQIMSIWDKADIIKVSDVELEFLTGNKTIDDETAMSLWHPNLKLLLVTLGENGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPAL 314          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLLC (Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 1.612e-66
Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 1
Query:    4 VEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            VEPCR+AH++AM+ AKEAGALLSYDPNLRLPLWPS EEA++QI SIWD A+VIKVSDVELEFLTGS+KIDDESA+SLWHPNLKLLLVTLGE GC YYTK F G V  FHV TV               K+VDDQ++LEDE RL+E+L+F+ ACGAITTTKKGAIPAL
Sbjct:  148 VEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGSNKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKKGAIPAL 314          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLHA (Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 8.000e-66
Identity = 121/167 (72.46%), Postives = 137/167 (82.04%), Query Frame = 1
Query:    4 VEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            VEPCR+AH++AM+ AKEAGALLSYDPNLRLPLWPS EEA++QI SIWD A+VIKVSDVELEFLTGS+KIDDESA+SLWHPNLKLLLVTLGE GC YYTK F G V  FHV TV               K+VDDQ++L DE RL+E+L+F+ ACGAITTTKKGAIPAL
Sbjct:  148 VEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGSNKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTKKGAIPAL 314          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK3_ARATH (Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.328e-65
Identity = 119/166 (71.69%), Postives = 139/166 (83.73%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAH++AM+ AKEAGALLSYDPNLR PLWPSPEEAR QIMSIWDKA++IKVSDVELEFLT +  +DD++A+SLWHPNLKLLLVTLGE GC Y+TK F G+V+ FHV+ V              +++VDDQSVLEDE RLR++L+FANACGAITTTKKGAIPAL
Sbjct:  148 EPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAMSLWHPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPAL 313          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK_SOLTU (Fructokinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.252e-59
Identity = 116/167 (69.46%), Postives = 128/167 (76.65%), Query Frame = 1
Query:    4 VEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            VEPCRSAHL+AM+ AKEAGALLSYDPNLRLPLW S  EAR+           IKVSDVELEFLTGSDKIDDESA+SLWHPNLKLLLVTLGE GC YYTK F G+V  FHV TV               K+VDDQ++LEDE RL+E+L+F+ ACGAITTTKKGAIPAL
Sbjct:  149 VEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWSSEAEARK----------AIKVSDVELEFLTGSDKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKKFHGSVGGFHVKTVDTTGAGDSFVGALLTKIVDDQAILEDEARLKEVLRFSCACGAITTTKKGAIPAL 305          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 1.415e-54
Identity = 100/166 (60.24%), Postives = 125/166 (75.30%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAHL AM+ AKEAGALLSYDPNLR  LWPS EEAR +I+SIWD+A+++KVS+VELEFLTG D ++D+  + LW P +KLLLVTLG+ GC+YY + FRGAV ++ V  V              R++V D S L+D+ +L E +KFANACGAIT TKKGAIP+L
Sbjct:  145 EPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSL 310          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSI (Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.414e-54
Identity = 100/166 (60.24%), Postives = 124/166 (74.70%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAHL AM+ AKEAGALLSYDPNLR  LWPS EEAR +I+SIWD A+++KVS+VELEFLTG D ++D+  + LW P +KLLLVTLG+ GC+YY + FRGAV ++ V  V              R++V D S L+D+ +L E +KFANACGAIT TKKGAIP+L
Sbjct:  145 EPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDHADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSL 310          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK1_MAIZE (Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.414e-54
Identity = 101/166 (60.84%), Postives = 125/166 (75.30%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCR+AHL AM+ AKEAGALLSYDPNLR  LWPS EEAR QI+SIWD+A+++KVS+VELEFLTG D ++D+  + LW P +KLLLVTLG+ GC+YY + F GAV +F V  V              +++V D S L+DE +L E +KFANACGAITTTKKGAIP+L
Sbjct:  145 EPCRTAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTQILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFHGAVPSFKVQQVDTTGAGDAFVGALLQRIVKDPSSLQDEKKLVESIKFANACGAITTTKKGAIPSL 310          
The following BLAST results are available for this feature:
BLAST of CF832283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SCRK1_ARATH3.139e-7077.25Probable fructokinase-1 OS=Arabidopsis thaliana GN... [more]
SCRK4_ARATH1.319e-6876.65Probable fructokinase-4 OS=Arabidopsis thaliana GN... [more]
SCRK2_ARATH3.837e-6874.10Probable fructokinase-2 OS=Arabidopsis thaliana GN... [more]
SCRK2_SOLLC1.612e-6673.05Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=... [more]
SCRK2_SOLHA8.000e-6672.46Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=... [more]
SCRK3_ARATH2.328e-6571.69Probable fructokinase-3 OS=Arabidopsis thaliana GN... [more]
SCRK_SOLTU4.252e-5969.46Fructokinase OS=Solanum tuberosum PE=2 SV=1[more]
SCRK1_ORYSJ1.415e-5460.24Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK1_ORYSI2.414e-5460.24Fructokinase-1 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK1_MAIZE2.414e-5460.84Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832283 ID=CF832283; Name=CF832283; organism=Citrus sinensis; type=EST; length=506bp
AGGGTGGAGCCATGCCGATCAGCGCACTTGGAGGCAATGAAAGCAGCCAA
GGAAGCAGGAGCCCTTCTCTCATACGACCCCAACCTCCGGCTACCGTTGT
GGCCCTCGCCGGAGGAGGCGCGCGAGCAGATAATGAGCATCTGGGACAAG
GCCGAGGTAATCAAAGTCAGTGATGTGGAGCTTGAATTCCTCACCGGGAG
TGACAAGATTGATGATGAATCAGCATTGTCGCTTTGGCATCCCAACTTGA
AACTCCTTTTGGTCACCCTTGGTGAGCATGGCTGCAGATACTACACCAAG
AGTTTCAGAGGAGCAGTGGATGCTTTTCATGTGAACACAGTAGATACAAC
CGGCGCTGGTGATGCATTTGGTGGGGGTCTTTTACGGAAGCTTGTTGATG
ACCAATCTGTTCTTGAGGATGAACCAAGGTTGCGGGAGATATTGAAATTT
GCAAATGCCTGTGGAGCCATCACTACCACCAAGAAGGGAGCAATTCCAGC
TCTACC
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