CF832301

Overview
NameCF832301
Unique NameCF832301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:327..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_CATRO (NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46
Identity = 85/106 (80.19%), Postives = 98/106 (92.45%), Query Frame = -2
Query:  419 MDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 736
            MDYIYEDELN+F++ GALS+L+VAFSREGP K+YVQHKM EK+ DIW M+S+GAY+YVCGDAKGMARDVHRTLHTI QEQGS+DS++AE  VKNLQMTGRYLRDVW
Sbjct:  609 MDYIYEDELNHFLEIGALSELLVAFSREGPTKQYVQHKMAEKASDIWRMISDGAYVYVCGDAKGMARDVHRTLHTIAQEQGSMDSTQAEGFVKNLQMTGRYLRDVW 714          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_PHAAU (NADPH--cytochrome P450 reductase OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.314e-41
Identity = 78/106 (73.58%), Postives = 96/106 (90.57%), Query Frame = -2
Query:  419 MDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 736
            MD+IYEDEL +FV+ G+LS+LIVAFSREG  KEYVQHKMM+K+  +W+++S+G YLYVCGDAKGMARDVHRTLH+IVQEQ ++DS+KAE++VK LQM GRYLRDVW
Sbjct:  585 MDFIYEDELKSFVEQGSLSELIVAFSREGAEKEYVQHKMMDKAAHLWSLISQGGYLYVCGDAKGMARDVHRTLHSIVQEQENVDSTKAEAIVKKLQMDGRYLRDVW 690          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_BOVIN (NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F + GAL+QL VAFSRE P K YVQH + +    +W ++ EG A++YVCGDA+ MARDV  T + IV EQG+++ ++A   VK L   GRY  DVW
Sbjct:  572 DYLYREELAGFHKDGALTQLNVAFSREQPQKVYVQHLLKKDKEHLWKLIHEGGAHIYVCGDARNMARDVQNTFYDIVAEQGAMEHAQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio cholerae GN=cysJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 50/105 (47.62%), Postives = 74/105 (70.48%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG L++L VAFSR+   K YVQH+++E++  +W  L EGAY YVCGDA  MA+DVH+ L T+V++QG L+  +AE  V  L+   RY RDV+
Sbjct:  510 DFLYQVEWQKYLKSGVLNRLDVAFSRDQHEKVYVQHRLLEQAELVWQWLQEGAYFYVCGDASRMAKDVHQALITVVEQQGGLNREQAEEYVSELRKAKRYQRDVY 614          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBC3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=cysJ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23
Identity = 49/105 (46.67%), Postives = 74/105 (70.48%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG L++L VAFSR+   K YVQH++++++  +W  L EGAY YVCGDA  MA+DVH+ L T+V++QG L+  +AE  V  L+   RY RDV+
Sbjct:  510 DFLYQVEWQKYLKSGVLNRLDVAFSRDQHEKVYVQHRLLDQAELVWQWLQEGAYFYVCGDASRMAKDVHQALITVVEQQGGLNREQAEEYVSELRKAKRYQRDVY 614          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: REDB_DICDI (NADPH oxidoreductase B OS=Dictyostelium discoideum GN=redB PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = -2
Query:  419 MDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 736
            +DYIY +EL  + QS  L  L+VAFSR+   K YVQ+K++E    +W +L++GAY YVCGD + M++ V + L +I++E GS D + A+  + ++   GRYL+DVW
Sbjct:  561 VDYIYREELEQYHQSSVLGDLVVAFSRKTSQKVYVQNKLLEHKEKVWELLNKGAYFYVCGDGRNMSKAVQQALLSIIKEFGSKDDNSAQQFIDDMSSHGRYLQDVW 666          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_HUMAN (NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F + GAL+QL VAFSRE   K YVQH + +    +W ++  GA++YVCGDA+ MARDV  T + IV E G+++ ++A   +K L   GRY  DVW
Sbjct:  572 DYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVW 676          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_RABIT (NADPH--cytochrome P450 reductase OS=Oryctolagus cuniculus GN=POR PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.778e-22
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F + G LSQL VAFSRE   K YVQH +      +W ++ EG A++YVCGDA+ MARDV  T + IV E G+++ ++A   VK L   GRY  DVW
Sbjct:  573 DYLYREELAGFQKDGTLSQLNVAFSREQAQKVYVQHLLRRDKEHLWRLIHEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYVKKLMTKGRYSLDVW 678          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_PIG (NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F   GAL++L VAFSRE P K YVQH +      +W ++ +G A++Y+CGDA+ MARDV  T   IV EQG ++ ++A   VK L   GRY  DVW
Sbjct:  572 DYLYREELAQFHAKGALTRLSVAFSREQPQKVYVQHLLKRDKEHLWKLIHDGGAHIYICGDARNMARDVQNTFCDIVAEQGPMEHAQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_MOUSE (NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F + GAL+QL VAFSRE   K YVQH +      +W ++ EG A++YVCGDA+ MA+DV  T + IV E G ++ ++A   VK L   GRY  DVW
Sbjct:  572 DYLYREELARFHKDGALTQLNVAFSREQAHKVYVQHLLKRDKEHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVW 677          
The following BLAST results are available for this feature:
BLAST of CF832301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
NCPR_CATRO3.021e-4680.19NADPH--cytochrome P450 reductase OS=Catharanthus r... [more]
NCPR_PHAAU1.314e-4173.58NADPH--cytochrome P450 reductase OS=Phaseolus aure... [more]
NCPR_BOVIN9.458e-2450.94NADPH--cytochrome P450 reductase OS=Bos taurus GN=... [more]
CYSJ_VIBCH3.594e-2347.62Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBC38.007e-2346.67Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
REDB_DICDI1.046e-2244.34NADPH oxidoreductase B OS=Dictyostelium discoideum... [more]
NCPR_HUMAN1.366e-2247.62NADPH--cytochrome P450 reductase OS=Homo sapiens G... [more]
NCPR_RABIT6.778e-2249.06NADPH--cytochrome P450 reductase OS=Oryctolagus cu... [more]
NCPR_PIG8.852e-2248.11NADPH--cytochrome P450 reductase OS=Sus scrofa GN=... [more]
NCPR_MOUSE3.364e-2148.11NADPH--cytochrome P450 reductase OS=Mus musculus G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832301 ID=CF832301; Name=CF832301; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTAATATGAGAAACCAAACTTGCAGTTTATATTAT
CCATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATT
GAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCC
TAGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACA
AAAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAA
AAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAAT
AGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATT
TATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCA
GGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTT
GCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGC
TCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTT
GGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGA
TATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGT
CCCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAAC
AAAGTTGTTGAGCTCATCCTCATAAATGTAATCCATC
back to top