CF832329

Overview
NameCF832329
Unique NameCF832329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:731..1398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.011e-95
Identity = 171/222 (77.03%), Postives = 187/222 (84.23%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + VEV KK  N+ F            SRN VDGSTTF SATVAVVG+GFLARDITFQNTAGPSKHQAVALRVG+DLSAFY CDMLAYQDTLYVHS RQF+ +C+IAGTVDFIFGNAAAV QNCDIHAR+PN  Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL  V+GSF TYLGRPWK YSRTV+MQS I+DVI+PAGW+EW GNFAL+TLFY E+Q
Sbjct:  311 YRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQ 532          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 5.017e-95
Identity = 169/222 (76.13%), Postives = 186/222 (83.78%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + VEV KK  N+ F            SRN VDGSTTF SAT AVVG+GFLARDITFQNTAGPSKHQAVALRVG+DLSAFY CDMLAYQDTLYVHS RQF+ +C+IAGTVDFIFGNAAAV QNCDIHAR+PN  Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL  V+GSF TYLGRPWK YSRTV+MQS I+D+I+PAGW+EW GNFAL+TLFY E+Q
Sbjct:  311 YRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQ 532          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 3.252e-94
Identity = 169/221 (76.47%), Postives = 182/221 (82.35%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + VEV KKK N+ F            SRN VDGSTTF+SATVA VG+ FLARDITFQNTAGPSKHQAVALRVGSD SAFY+CDM AYQDTLYVHS RQF+  C I GTVDFIFGNAAAV Q+CDI+ARRPN  Q+NMVTAQGR DPNQNTGIVIQ CRIG TSDLLAVKG+F TYLGRPWK YSRTV+MQSDISDVI P GW+EWSG+FALDTL Y EY
Sbjct:  314 YRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREY 534          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 340.502 bits (872), Expect = 4.695e-93
Identity = 168/221 (76.02%), Postives = 181/221 (81.90%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + VEV KKK N+ F            SRN VDGSTTF+SATVA VG+ FLARDITFQNTAGPSKHQAVALRVGSD SAFY CDMLAYQDTLYVHS RQF+  C+IAGTVDFIFGNAA V Q+CDIHARRPN  Q+NMVTAQGR DPNQNTGIVIQKCRIGATSDL +VKGSF TYLGRPWK YS+TV+MQS ISDVI P GW EW+G FAL+TL Y EY
Sbjct:  319 YRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREY 539          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.784e-92
Identity = 166/222 (74.77%), Postives = 182/222 (81.98%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V+VPKKK N+ F            S+N  DGSTTFNSATVA VG GFLARDITFQNTAG +KHQAVALRVGSDLSAFYRCD+LAYQD+LYVHS RQF+ +C IAGTVDFIFGNAA V Q+CDIHARRP   Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL  V+ SF TYLGRPWK YSRTVVMQS I++VINPAGW+ W GNFALDTL+Y EYQ
Sbjct:   46 YRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQ 267          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.157e-91
Identity = 165/221 (74.66%), Postives = 179/221 (81.00%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V+VPKKK N+ F            SRN  DGSTTF+SATV  V    LARDITFQNTAG SKHQAVAL VGSDLSAFYRCDMLAYQDTLYVHS RQF+  C++AGTVDFIFGN AAVFQ+CDIHARRP   Q+NMVTAQGR DPNQNTGIVIQKCRIGATSDL  V+ SF TYLGRPWK YSRTV+MQS I+DVI PAGW+EW+GNFALDTLFY EY
Sbjct:  310 YRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEY 530          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.040e-79
Identity = 138/222 (62.16%), Postives = 170/222 (76.58%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V+V KKK NL F            +R+ VDG TTF S+TVAVVG GF+AR I+F+N AGPSKHQAVALR G+D SAFY+C  + YQDTLYVHSLRQFY+ C + GT+DFIFGNAAAV Q C+++AR+PN NQ+N+ TAQGRDDPNQNTGI I  C++ A +DL+ V  SF+TYLGRPWK YSRTV + S +  +I+PAGW EWSG+FAL TL+Y EY+
Sbjct:   47 YFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYK 268          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.982e-75
Identity = 138/221 (62.44%), Postives = 163/221 (73.76%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y +T+++ KKK NL              S N +DGSTTF SATVA  GDGF+A+DI FQNTAGP+KHQAVALRV +D +   RC + AYQDTLY H+LRQFY    I GTVDFIFGN+A VFQNCDI AR P   Q+NM+TAQGR+D NQNT I IQKC+I A+SDL  VKGS +T+LGRPWK YSRTV+MQS I + I+PAGW+ W G FAL TL+Y EY
Sbjct:  284 YKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEY 504          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.855e-73
Identity = 133/221 (60.18%), Postives = 158/221 (71.49%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y++ VE+ KKK N+              +R+ +DG TTF SAT AV G GF+ARDITFQNTAGP KHQAVA+R  +DL  FYRC M  YQDTLY HS+RQF+  CII GTVDFIFG+A AVFQ+C I A++  PNQ+N +TAQGR DPN+ TG  IQ   I A +DLL    +  TYLGRPWK YSRTV MQ+ +SD INP GW EW+GNFALDTL+Y EY
Sbjct:  252 YVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEY 472          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.132e-73
Identity = 136/221 (61.54%), Postives = 164/221 (74.21%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + +EV  K  N+ F            S++   G+TTF SATVAVVGD F+ARDIT +NTAGP+ HQAVALR GSDLS FYRC    YQDTLYVHS RQFY  C I GTVDFIFGNAA V QNC+I AR+P PN+ N +TAQGR DPNQ+TGI+I  CR+ A SDL  V+ S +T+LGRPWK+YSRTV +++ +  +INPAGW EWSG+FAL+TL+YAEY
Sbjct:  240 YNENIEVKLK--NIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEY 457          
The following BLAST results are available for this feature:
BLAST of CF832329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME3_CITSI1.011e-9577.03Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI5.017e-9576.13Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME2_ARATH3.252e-9476.47Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH4.695e-9376.02Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME_DAUCA1.784e-9274.77Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PMEU1_SOLLC1.157e-9174.66Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME_ACTDE5.040e-7962.16Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME18_ARATH1.982e-7562.44Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME32_ARATH1.855e-7360.18Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME2_CITSI4.132e-7361.54Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832329 ID=CF832329; Name=CF832329; organism=Citrus sinensis; type=EST; length=668bp
TACATAAAAACTGTGGAGGTGCCGAAGAAGAAAATTAATCTTAAGTTTAT
TGGATATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGAGGTTG
ATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGGA
TTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAACA
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCAA
TTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAAA
TGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAATC
CAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCAG
AACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATTT
ACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAGC
GGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAAC
CCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTT
TTATGCAGAGTATCAAAA
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