CF832334

Overview
NameCF832334
Unique NameCF832334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13711 contig Csv1_Contig13711:1192..1969. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832334 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.477e-33
Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = -1
Query:  464 MNQHVNNVTYIGWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNG-SPAITGDKEDNHQFLHLLRLSGDGSEINRGRSVWRKK 778
            MNQHVNNV YIGW+LES+P++V+ THEL+TITLDYRRECQ DDVVDSLTS E  ED   V+K+ GTNG + A T  ++D+ +FLH LR+SG G EINRGR+ WRKK
Sbjct:  261 MNQHVNNVAYIGWVLESIPKEVLYTHELETITLDYRRECQHDDVVDSLTSPEVDEDT-AVTKIIGTNGHAAAATEARDDSLKFLHFLRVSGQGLEINRGRTEWRKK 365          
BLAST of CF832334 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.891e-17
Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = -1
Query:  464 MNQHVNNVTYIGWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGRSVWRKK 778
            +NQHVNNV YIGW+LES P +V++T EL ++TL+YRREC ++ V++SLT+ +P           G  GS           QF HLLRL  DG EI +GR+ WR K
Sbjct:  313 VNQHVNNVKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLESLTAMDP---------SGGGYGS-----------QFQHLLRLE-DGGEIVKGRTEWRPK 396          
BLAST of CF832334 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 50/108 (46.30%), Postives = 65/108 (60.19%), Query Frame = -1
Query:  455 MNQHVNNVTYIGWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGRSVWRKKPAR 778
            +NQHVNNV YIGW+LES P  ++++HEL  +TL+YRREC +D V+ SLT+         V+               E N Q  HLLRL  DG+EI RGR+ WR K A+
Sbjct:  309 VNQHVNNVKYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQSLTTVSDSNTENAVNV-------------GEFNCQ--HLLRLD-DGAEIVRGRTRWRPKHAK 400          
BLAST of CF832334 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = -1
Query:  464 MNQHVNNVTYIGWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGRSVWRKK 778
            +NQHVNN+ Y+ W+ E++P  + ++H + + TL+YRREC +D V+ SLT+            + G +    +  D        HLL+L G GSE+ R R+ WR K
Sbjct:  282 VNQHVNNLKYVAWVFETVPDSIFESHHISSFTLEYRRECTRDSVLRSLTT------------VSGGSSEAGLVCD--------HLLQLEG-GSEVLRARTEWRPK 365          
BLAST of CF832334 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13
Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = -1
Query:  464 MNQHVNNVTYIGWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGRSVWRKK 778
            +NQHVNN+ Y+ W+LE++P  + ++H + + T++YRREC  D V+ SLT+                       G  E      HLL+L G GSE+ R ++ WR K
Sbjct:  282 INQHVNNIKYVDWILETVPDSIFESHHISSFTIEYRRECTMDSVLQSLTTVS--------------------GGSSEAGLVCEHLLQLEG-GSEVLRAKTEWRPK 365          
The following BLAST results are available for this feature:
BLAST of CF832334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FATA_CORSA5.477e-3366.98Oleoyl-acyl carrier protein thioesterase, chloropl... [more]
FATB_CUPHO1.891e-1747.62Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_GOSHI7.186e-1746.30Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_UMBCA8.222e-1336.19Lauroyl-acyl carrier protein thioesterase, chlorop... [more]
FATB_CINCA8.222e-1335.24Myristoyl-acyl carrier protein thioesterase, chlor... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01L06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832334 ID=CF832334; Name=CF832334; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTAGGGAACATCATACCATTTTTTTTTTTTTTTATTTC
AGATGAAACAACCGGAACAAATCTGCTTCATTACATGGAGACAAAGTAAA
GTTGCTGAATTACTGCTTTTCTGATTCTGAATCCAAACTGTGTTTTCAAA
TACCAGTGAGACATATCTCAAAGCTCTAAGATCATGATAATCATGATAAA
AAAGCAAACAACAAAGATACAACAACTGATTCTGGGAGTTTGAAGTGACC
TACGTATGACCAGAATCAATTACATTCCCTCTTGCTCAATCTATCAATCA
TCAATCAATAGCTCTTAAGTTACTTGTCAACACAAACTCTATCCTCACAG
CACATAAATTTGGAGCAAAGTCTATAGAGGAAAAGGAAACTAGAGAGAAG
AAAACATTTCTGGAACCCAGTGAAATAAGAGAGCAAAACTTAATTATTTC
CTTATCTGGCAGGTTTCTTTCTCCACACTGAACGGCCCCGATTTATCTCC
GAGCCATCACCTGATAGTCTCAGCAAGTGTAAAAATTGATGATTGTCCTC
TTTGTCTCCAGTTATGGCAGGTGAGCCGTTTGTTCCCTGAAGTTTTGAAA
CTGGTTCTGCATCCTCGAATGGTTCTGCACTTGTTAGGGAATCAACTACA
TCGTCCTGTTGGCATTCTCGTCTGTAATCTAAGGTGATAGTCTGGAGTTC
GTGGGTGTCGATGACATCTTGAGGCATGCTCTCAAGTAACCAACCAATGT
AGGTGACATTATTAACATGCTGGTTCAT
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