CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1010 contig Csv1_Contig1010:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.400e-96
Identity = 172/242 (71.07%), Postives = 204/242 (84.30%), Query Frame = 2
Query:    8 RTDRRILQ-SSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + D R L+ SSD  +EYD S+ L V ADGTG+F+TI +AI+FAPN S+DRV+I +K+GVY+EN++IP YKTNI L+G G D T IT +RSVGDGWTTFRSAT+AVSG+ FLARD+ I N AGPEK+QAVALRVNADF AL+RC   GYQDTLY HSFRQFYRECD+YGTIDYIFGNAAVV Q CNIVS+LP+PGQFTVITAQ +D  +E+TGIS+QNCSILA+EDL+ +S  VKSYLGRP R
Sbjct:  216 KKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWR 457          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.859e-70
Identity = 127/236 (53.81%), Postives = 171/236 (72.46%), Query Frame = 2
Query:   35 SDDDNEYDQ---SQVLTVDADGTGDFTTITDAINFAPNNSDDRV---VINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +DDDN+ +    S ++TV+ +GTG+FTTIT+A+N APN +D      VI +  GVYEEN+ I   K  + ++G G + T++T +R+V DGWTTF SAT AV+   F+A ++T  N AGPEK+QAVA+R +AD +  + CSF  YQDTLY HS RQFYRECD+YGT+D+IFGNAAVV Q CN+  R P+  QF  ITAQ + DPN+NTGISI NC+I   +DL +++ +VK+YLGRP
Sbjct:  244 ADDDNDVNTVLVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRP 479          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.123e-69
Identity = 130/245 (53.06%), Postives = 168/245 (68.57%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQ------SQVLTVDADGTGDFTTITDAINFAPNNSDDRV---VINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            RR L   D + + D       S ++TV  DGTG+FT IT A+  APNN+D      +I +  G+YEE + I   K  + ++G G + T++T +RSV DGWTTF SAT AV+   F+A ++T  N AGPEK+QAVALR  ADF+  + CSF  YQDTLY HS RQFYRECDVYGT+D+IFGNAAVV Q CN+  R P+P QF  ITAQ + DPN+NTG SIQNC+I   +DL +++ +VK+YLGRP
Sbjct:  241 RRKLADGDSNGDGDDGSMVLISDIVTVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRP 485          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.765e-68
Identity = 135/241 (56.02%), Postives = 167/241 (69.29%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LS  DRR+LQ S    +       TV  DG+GDFTT+  A+  AP  S+ R VI+IK GVY EN+E+   KTNI  LG G+  TIIT SR+V DG TTF SATVA  G+RFLARD+T +N AGP K+QAVALRV +DF+A ++C    YQDTLYVHS RQF+ +C + GT+D+IFGNAA VLQ C+I +R P  GQ  ++TAQ + DPN+NTGI IQNC I  T DL A   +  +YLGRP
Sbjct:  260 LSVGDRRLLQGSTIKAD------ATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRP 494          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 5.215e-67
Identity = 134/241 (55.60%), Postives = 166/241 (68.88%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LS  DRR+LQ S    +       TV ADG+G F T+  A+  AP NS+ R VI+IK GVY EN+E+   K NI  +G G+  TIIT SR+V DG TTF SATVA  G+RFLARD+T +N AGP K+QAVALRV +DF+A + C    YQDTLYVHS RQF+ +C + GT+D+IFGNAAVVLQ C+I +R P  GQ  ++TAQ + DPN+NTGI IQ C I AT DL +   S  +YLGRP
Sbjct:  265 LSAGDRRLLQGSGVKAD------ATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRP 499          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.588e-66
Identity = 128/242 (52.89%), Postives = 165/242 (68.18%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEE-NLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            L R DR +L +     + D    +TV  DG+G F TI +AI  AP +S  R VI +K G YEE NL++   KTN+  +G GK  T+IT  +S+ D  TTF +AT A +G  F+ RD+T EN AGP K+QAVALRV  D A ++RC+  GYQD LYVHS RQF+REC++YGT+D+IFGNAAV+LQ+CNI +R P+  Q   ITAQ + DPN+NTGISI  C +LAT DL A+  S  +YLGRP
Sbjct:  255 LKREDRELLGTPTSAIQAD----ITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRP 492          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.415e-66
Identity = 125/218 (57.34%), Postives = 156/218 (71.56%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            + V  DG+G+FTT+  A+  A ++S  R VI IK+G Y E +++   KTN+  +G G   T I  +RSV DGWTTFRS+TVAV G  F+AR ++ EN AGP K+QAVALR  ADF+A ++CSF GYQDTLYVHS RQFY ECDVYGTID+IFGNAA VLQ CN+ +R P   Q  + TAQ +DDPN+NTGISI NC + A  DL    +S K+YLGRP
Sbjct:   10 VVVAKDGSGNFTTVGAAVAAAKDSSTARFVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRP 227          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.836e-66
Identity = 129/232 (55.60%), Postives = 166/232 (71.55%), Query Frame = 2
Query:   44 DNEYDQSQVLTVDA----DGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSA-SVKSYLGRP 724
            D +  Q+  ++VDA    DGTG+FT +TDA+  AP+ S  R VI IK+G Y+EN+EI   K N+ ++G G D+TII+ +RS  DGWTTFRSAT AVSG  F+ARD+T EN AGPEK+QAVALR ++D +  +RC+  GYQDTLY H+ RQFYR+C + GT+D+IFG+A VV Q C I+++  LP Q   ITAQ + DPNE TGISIQ C+I A  DL A S  S  +YLGRP
Sbjct:  196 DRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRP 427          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.836e-66
Identity = 125/237 (52.74%), Postives = 164/237 (69.20%), Query Frame = 2
Query:   14 DRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            DRR+LQ+   D E D    + V  DG+GD+ T+ +A+   P+NS  RV++ ++ G+YEEN++    K N+ L+G G D TIIT SR+V DG TTF SATVA  GD F+A+D+  +N AGPEKYQAVALR+ AD   + RC    YQDTLY H++RQFYR+ ++ GT+D+IFGNAAVV Q CN++ R  + GQ   ITAQ + DPN+NTG SIQNC I A+ DL     + KSYLGRP
Sbjct:  218 DRRLLQTLGKDIEPD----IVVAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAGPEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRP 450          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.882e-65
Identity = 126/241 (52.28%), Postives = 168/241 (69.71%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S +DR +LQ   D+ + +    L V  +GTG++TTI +AI+ APN+S+ R VI IK G Y EN+EIP  KT I  +G G   T+I  +RS  DGWT F SATV V G  F+A+DL+  N AGPEK+QAVALR ++D +A +RCSF  YQDT+YVHS +QFYRECD+YGT+D+IFG+A+VV Q C++ +R P P Q  + TAQ +++  E TGISI +  ILA  DL    A+ K+YLGRP
Sbjct:  189 VSGSDRNLLQDPVDETKVN----LVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRP 425          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME12_ARATH2.400e-9671.07Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME41_ARATH3.859e-7053.81Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME7_ARATH1.123e-6953.06Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME2_ARATH2.765e-6856.02Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH5.215e-6755.60Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME61_ARATH2.588e-6652.89Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_ACTDE4.415e-6657.34Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME_PRUPE9.836e-6655.60Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME1_FICAW9.836e-6652.74Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME40_ARATH4.882e-6552.28Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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