CF832367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_SOLTU (40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.531e-28 Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 500 LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_SOLLC (40S ribosomal protein S27a OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.531e-28 Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 500 LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_LUPAL (40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.448e-26 Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 491 LAVLQFYKVDDSGKVQRLRKECPN ECGAGTFMANHFDRHYCGKCG TYVYQKA Sbjct: 24 LAVLQFYKVDDSGKVQRLRKECPNTECGAGTFMANHFDRHYCGKCGKTYVYQKA 77
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: R27AB_ARATH (40S ribosomal protein S27a-2 OS=Arabidopsis thaliana GN=UBQ6 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAG 494 LAVLQFYKVD SGKVQRLRKECPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G Sbjct: 24 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: R27AC_ARATH (40S ribosomal protein S27a-3 OS=Arabidopsis thaliana GN=UBQ5 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.998e-25 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAG 494 LAVLQFYK+D SGKVQRLRKECPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G Sbjct: 24 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_ASPOF (40S ribosomal protein S27a OS=Asparagus officinalis PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 488 LAVLQFYKVDD+GKV RLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQK Sbjct: 24 LAVLQFYKVDDTGKVIRLRKECPNAECGAGTFMANHKDRHYCGKCGLTYVYQK 76
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_HORVU (40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 3 Query: 330 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 491 LAVLQFYKVDD+ GKV RLRKECPNA+CGAGTFMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQL DGRTLADYNIQKESTLHLV Sbjct: 16 EVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22 Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLADYNIQKESTLHLV Sbjct: 16 EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22 Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLADYNIQKESTLHLV Sbjct: 16 EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70 The following BLAST results are available for this feature:
BLAST of CF832367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832367 ID=CF832367; Name=CF832367; organism=Citrus sinensis; type=EST; length=618bpback to top |