CF832412

Overview
NameCF832412
Unique NameCF832412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig151 contig Csv1_Contig151:401..1094. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.496e-84
Identity = 144/183 (78.69%), Postives = 166/183 (90.71%), Query Frame = -1
Query:  162 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDKGLNAYSISYGSCLLFNSMFPRHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 710
            ANMRARNY IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK  KHQ++SWTVWDRW +  N TLR+LL+WL++KGLNAYSIS G+ LL+NSMFPRHKER+D+KVVD+ R+VAK E+P YR+H DVVVAC D+DDND+DIP +S+YF
Sbjct:  868 ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYF 1050          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.496e-84
Identity = 144/183 (78.69%), Postives = 166/183 (90.71%), Query Frame = -1
Query:  162 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDKGLNAYSISYGSCLLFNSMFPRHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 710
            ANMRARNY IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK  KHQ++SWTVWDRW +  N TLR+LL+WL++KGLNAYSIS G+ LL+NSMFPRHKER+D+KVVD+ R+VAK E+P YR+H DVVVAC D+DDND+DIP +S+YF
Sbjct:  868 ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYF 1050          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.267e-78
Identity = 137/183 (74.86%), Postives = 159/183 (86.89%), Query Frame = -1
Query:  162 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDKGLNAYSISYGSCLLFNSMFPRHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 710
            ANMRARNY IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKV+ G H +EDYRNTFANLALPLFSMAEPVPPKV KH++ SWTVWDRW ++ N TL +LLQW  DKGL AYSIS G+ LL+N+MF RHK+R+ KKVVD+ R+VAK ++P YR+H D+ VAC DED+ND+DIP +S+YF
Sbjct:  870 ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPVEDYRNTFANLALPLFSMAEPVPPKVMKHKETSWTVWDRWSVQGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFARHKDRLTKKVVDIAREVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYF 1052          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1_CANAL (Ubiquitin-activating enzyme E1 1 (Fragment) OS=Candida albicans GN=UBA1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37
Identity = 80/185 (43.24%), Postives = 120/185 (64.86%), Query Frame = -1
Query:  168 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRWILRDNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISI 710
            +N RA NYGI   D  K KFIAG+IIPAIAT+TA+ TGLVCLELYKV+DG   +E Y+N F NLALP    +EP+     K+ +  +  +WDR+ L  + TL++LL   + ++GL    +SYG  LL+ S FP  + K+R+  K+  L+++V+K E+P + ++    + C DE+  D+++P I +
Sbjct:   19 SNCRALNYGIEIADAHKTKFIAGKIIPAIATTTALVTGLVCLELYKVVDGKDDIEQYKNGFINLALPFIGFSEPIKSPEGKYNNKKFDQIWDRFELNGDITLQELLDHFEKEEGLTISMLSYGVSLLYASFFPPKKVKDRLGLKLTSLIKEVSKKEVPSHVKNLIFEICCDDEEGEDVEVPYICV 203          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 74/188 (39.36%), Postives = 119/188 (63.30%), Query Frame = -1
Query:  174 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 710
            +N+RA NYGI   D+ K+K IAG+IIPAIAT+T+   GLVCLELYKV+ G  +LE Y+N+F NLALPLFS + P+ P+  ++ D  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +     + C  +  +DI++P +
Sbjct:  866 SNLRAENYGISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGHQQLESYKNSFINLALPLFSFSAPLAPECHQYYDQEWTLWDRFDVQGLQPSGEEMTLKQFLDYFKTEHKLEVIMLSQGVSMLYSVFMPASKLKERLDQPMTEIVSCVSKQKLGHHVKSLVFELCCNSDSGDDIEVPYV 1053          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33
Identity = 75/185 (40.54%), Postives = 120/185 (64.86%), Query Frame = -1
Query:  168 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPV-PPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFPRHK--ERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISI 710
            +N+RA NY I   D+ K KF+AG+I+PA+ TSTA+ +GLVCLEL K++DG  K+E+Y+N F NLA+ LF+ ++P+  PK+  +      +WDR+ L D  TL++L+ + Q ++GL    +S G  LL+ +  P  K  ER+  K+ +LV  + K +L P+R+H  + + C D +  D+++P I I
Sbjct:  827 SNLRAMNYDITPADRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFSDPIASPKMKVNGKEIDKIWDRYNLPD-CTLQELIDYFQKEEGLEVTMLSSGVSLLYANFQPPKKLAERLPLKISELVEQITKKKLEPFRKHLVLEICCDDANGEDVEVPFICI 1010          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.373e-32
Identity = 72/188 (38.30%), Postives = 116/188 (61.70%), Query Frame = -1
Query:  174 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 710
            +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +   + + C DE   D+++P +
Sbjct:  866 SNLRAENYDIPSADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYV 1053          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32
Identity = 72/188 (38.30%), Postives = 115/188 (61.17%), Query Frame = -1
Query:  174 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 710
            +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G   L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +   + + C DE   D+++P +
Sbjct:  866 SNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRHLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYV 1053          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32
Identity = 72/188 (38.30%), Postives = 115/188 (61.17%), Query Frame = -1
Query:  174 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 710
            +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L  Y+N F NLALP F  +EP+     ++ +  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +   + + C DE   D+++P +
Sbjct:  866 SNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLNSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYV 1053          
BLAST of CF832412 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32
Identity = 73/186 (39.25%), Postives = 117/186 (62.90%), Query Frame = -1
Query:  165 ANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRWILRDNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIY 710
            +N RA+NY I   D+ K KFIAGRIIPAIAT+T++ TGLV LELYK++D    +E Y+N F NLALP F  +EP+     ++ +  +  +WDR+ ++ +  L  L++  + D+GL    +SYG  LL+ S FP  + KER++  +  LV+ V K ++P +     + +   D++  D+++P I+I+
Sbjct:  838 SNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYGVSLLYASFFPPKKLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITIH 1023          
The following BLAST results are available for this feature:
BLAST of CF832412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBE12_WHEAT4.496e-8478.69Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE11_WHEAT4.496e-8478.69Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE13_WHEAT1.267e-7874.86Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_CANAL5.385e-3743.24Ubiquitin-activating enzyme E1 1 (Fragment) OS=Can... [more]
UBA1Y_MOUSE5.573e-3439.36Ubiquitin-like modifier-activating enzyme 1 Y OS=M... [more]
UBA1_SCHPO2.118e-3340.54Ubiquitin-activating enzyme E1 1 OS=Schizosaccharo... [more]
UBA1_HUMAN1.373e-3238.30Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBA1_RABIT3.058e-3238.30Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]
UBA1_BOVIN3.058e-3238.30Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]
UBA1_YEAST3.994e-3239.25Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832412 ID=CF832412; Name=CF832412; organism=Citrus sinensis; type=EST; length=710bp
TTTTTTTTTTTTTTTTTGGACTGAATAAGCTACTGATTGATAGCCGAATA
TTTAGTCACCATAACAAATCCAGTACATCTGCTCATGTTCACAAAGCATA
TCATTCATTTTTCATCCTACCAATAAATGTCAACTAATTAACTAGACGGA
AACACCTAACTAAAGTAAATTGAGATTTGAGGAATATCAATATCATTGTC
ATCTTCATCCACGCATGCGACTACCACATCAAAATGTTGTCGATATGGAG
GCAGTTCTGCCTTGGCCACATCCCTAACCAGATCCACCACCTTCTTGTCC
ATCCTTTCTTTGTGCCTCGGAAACATGCTGTTAAAAAGCAAGCAACTCCC
ATAGGAGATGCTGTAAGCATTCAAGCCCTTGTCCTGCAACCACTGAAGAA
GTTGTCTTAGTGTAGGGTTGTCCCGCAAAATCCACCGGTCCCACACAGTC
CAGCTCATATCCTGATGCTTGAACACCTTAGGTGGAACTGGCTCAGCCAT
CGAGAACAGAGGGAGGGCCAGATTGGCAAAGGTATTTCGGTAGTCTTCCA
GTTTGTGCCCACCATCTAGAACCTTATAAAGCTCCAAGCACACAAGACCA
GTTGCCATGGCAGTAGAGGTTGCGATTGCTGGGATAATCCTCCCTGCAAT
GAACTTGGCCTTGAGCTTGTCAACTTCAGGGATGCCATAGTTCCTTGCCC
TCATGTTTGC
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