CF832468

Overview
NameCF832468
Unique NameCF832468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10374 contig Csv1_Contig10374:19..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.443e-45
Identity = 106/217 (48.85%), Postives = 134/217 (61.75%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI        LGP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  E+   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDGGVA   +P LL
Sbjct:   14 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------LGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHYFVTHTS-NGDRYEFNLVDGGVATVGDPALL 215          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.872e-45
Identity = 103/216 (47.69%), Postives = 133/216 (61.57%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAANNPTLL 747
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GT TGGL+T M+T PN+   PF AAKDI  FY +HGPKIF     S F           L+ PKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  +    +A++ DIC ST+AAPTY PPHY  T  S +G    F+LVDG VAA +P+LL
Sbjct:   14 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTGTGGLLTAMITTPNENNRPFAAAKDIIPFYFDHGPKIFEP---SGF----------HLVEPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKTPELDAKMYDICYSTAAAPTYFPPHYFATNTS-NGDQYDFNLVDGDVAAVDPSLL 215          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.308e-44
Identity = 105/217 (48.39%), Postives = 135/217 (62.21%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGPKIF Q S S F             GPKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAPT+ PPHY  T  S +G    F+LVDG VA  ++P LL
Sbjct:   26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMITTPNETNRPFAAAKDIVPFYFEHGPKIF-QSSGSIF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFPPHYFATNTS-NGDKYEFNLVDGAVATVDDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.308e-44
Identity = 104/217 (47.93%), Postives = 133/217 (61.29%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  E+   +A++ DIC ST+AAP Y PPH+  T  S +G T  F+LVDG VA   +P LL
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGAVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT07_SOLTU (Patatin-07 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44
Identity = 107/228 (46.93%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A+++DIC ST+AAPTY PPHY  T  S +G    F+LVDG VA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44
Identity = 108/228 (47.37%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FYLEHGP IF      N+S SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYLEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT15_SOLTU (Patatin-15 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44
Identity = 107/228 (46.93%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPH+  T  S +G T  F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44
Identity = 107/228 (46.93%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPH+  T  S +G T  F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT04_SOLTU (Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44
Identity = 107/228 (46.93%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPH+  T  S +G T  F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44
Identity = 104/216 (48.15%), Postives = 132/216 (61.11%), Query Frame = 1
Query:  106 KKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            K +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDGGVA   +P LL
Sbjct:   27 KMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALL 227          
The following BLAST results are available for this feature:
BLAST of CF832468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PT2K4_SOLTU3.443e-4548.85Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PT3K1_SOLTU5.872e-4547.69Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]
PATT5_SOLTU1.308e-4448.39Patatin-T5 OS=Solanum tuberosum PE=1 SV=1[more]
PAT0_SOLTU1.308e-4447.93Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PAT07_SOLTU2.231e-4446.93Patatin-07 OS=Solanum tuberosum PE=2 SV=1[more]
PATM3_SOLTU3.806e-4447.37Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]
PAT15_SOLTU3.806e-4446.93Patatin-15 OS=Solanum tuberosum PE=2 SV=1[more]
PAT06_SOLTU3.806e-4446.93Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PAT04_SOLTU3.806e-4446.93Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1[more]
PATM2_SOLTU4.971e-4448.15Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832468 ID=CF832468; Name=CF832468; organism=Citrus sinensis; type=EST; length=749bp
TAATTTCGAATCCTAATAGCTGCTCAATCTGATCGTACTTCTTTTTAACT
TCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCACTGCCGGTTCTGCAG
AAGGAAAGAAAATAACAGTTCTGAGCATCGATGGAGGTGGCATTCGAGGC
ATTATTCCTGGCACTATTTTAGCTTTTCTTGAATCCAAGCTCCAGGAATT
GGATGGACCAAGTGCAAGAATTGCAGATTATTTTGATGTAGTAGCAGGAA
CAAGCACCGGCGGATTGGTAACCACCATGCTTACGGCACCCAACAAGGAA
GGCGGACCTTTCATTGCTGCAAAGGATATCAATAATTTTTATCTCGAGCA
CGGTCCTAAAATTTTCCCTCAAATTAGCCGCAGCAACTTCTCGGAATCGA
TTGCAAGCTCTATCGATAAACGGCTGCTTGGACCAAAGTATGATGGGAAG
TACCTGCGGGCACTAGTGAACGAGCTACTAGGAGACGTTACTGTGAAAGA
GACTCTTACCAACGTGGTTATACCAACTTTTGACATAAAGCTTCTTCAGC
CAGTCATCTTCTCAACCACCGATGGAAAAGAGAACGTTTTGAAGAATGCT
CGGCTGGCTGATATATGCATCAGCACTTCTGCAGCGCCCACTTACCTCCC
ACCTCACTACTTGGAGACTAAGGACAGTGACAGTGGCGGAACCCGCACTT
TTGATCTTGTTGATGGCGGAGTTGCTGCCAATAACCCTACCCTATTGGC
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