CF832472

Overview
NameCF832472
Unique NameCF832472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832472 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.112e-19
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = -3 
Query:  442 EIGRFDA----EQFTPRFSGN--GVSLTLGLPHCENLSLSATHQSFLPSQN-IQLGRRVEIGEPNEFG--TIN----TQSPH----ASAAYENMNIQNRKRFAAQLLPDFVA 726
            E+ RFD     E    R+SGN  GVSLTLGLPHC++LS S  HQ F+ + + I +GRRV+IGE  E+G  TIN    T + H    A+AAY  MNIQN+KR+ AQLLPDFVA
Sbjct:  570 EMSRFDVVSDQELMAQRYSGNNNGVSLTLGLPHCDSLS-STHHQGFMQTHHGIPIGRRVKIGETEEYGPATINGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA 680
The following BLAST results are available for this feature:
BLAST of CF832472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BLH1_ARATH4.112e-1954.46BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01O15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832472 ID=CF832472; Name=CF832472; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTCTTTTTTCCAATTAAGCATCATGGCTCCTGTATTTCCAT
TTCCTTTATGAATGAAAATCATGAAATACAAATCAACACCATATATCTAC
TCACAATATTCCATATTTATATTGGTAATTCAGTATACCCAAATAACTAA
CTTTTATGATATCAATCCATCTATCAATCTTCAAAACTTACAAAATTAAT
ATACATCTCCTCAATCCACATGCCCAATACCTAATGCTATGTTATCTACT
GAACTCAAATGGTTCTATGCAAAAGTATAAACCTATCTATACTAACGTAA
CTTTTTCTTCTGCTTTCTTTACACTACCATGCATAAGCTTCCCTGTTCCC
AAAATGGCATTAGGGAACAGCAAATAATAGTGAAAAGACTCCAGCCTTTC
TCGCTTCTCCATAATCTTTGATTCTGCCTTTGATGCTTTCATGCAACAAA
GTCAGGCAACAGTTGTGCTGCGAACCTCTTCCTGTTCTGTATATTCATGT
TTTCATAAGCGGCCGAAGCGTGAGGAGACTGAGTGTTTATGGTACCAAAC
TCATTAGGCTCACCAATTTCGACCCTCCTTCCAAGTTGAATGTTTTGACT
TGGGAGAAAACTTTGATGAGTTGCTGACAATGAGAGATTCTCACAGTGTG
GGAGCCCAAGCGTAAGTGACACGCCATTGCCCGAAAACCTTGGAGTGAAT
TGCTCCGCATCAAACCTTCCAATTTCACCAATCGGGT
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