CF832477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832477 vs. ExPASy Swiss-Prot
Match: HDA2_ARATH (Histone deacetylase 2 OS=Arabidopsis thaliana GN=HDA2 PE=1 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 4.444e-66 Identity = 122/149 (81.88%), Postives = 135/149 (90.60%), Query Frame = -3 Query: 417 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGGYMKSSARVIANSVENLSRKGLI 863 IIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKVEV+SGTTT+EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG+LKISPDGI +RDEK FRFAR +NIP+VMLTSGGYMKSSARVIA+S+ENLSR+GLI Sbjct: 234 IIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 382
BLAST of CF832477 vs. ExPASy Swiss-Prot
Match: HDA11_MACFA (Histone deacetylase 11 OS=Macaca fascicularis GN=HDAC11 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.900e-41 Identity = 85/149 (57.05%), Postives = 109/149 (73.15%), Query Frame = -3 Query: 417 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGGYMKSSARVIANSVENLSRKGLI 863 IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ +E + P++V+YNAGTDILEGD LG L ISP GI RDE FR R R++PI+M+TSGGY K +AR+IA+S+ NL GLI Sbjct: 177 IIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
BLAST of CF832477 vs. ExPASy Swiss-Prot
Match: HDA11_HUMAN (Histone deacetylase 11 OS=Homo sapiens GN=HDAC11 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.102e-40 Identity = 84/149 (56.38%), Postives = 108/149 (72.48%), Query Frame = -3 Query: 417 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGGYMKSSARVIANSVENLSRKGLI 863 IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++ + P++V+YNAGTDILEGD LG L ISP GI RDE FR R R +PI+M+TSGGY K +AR+IA+S+ NL GLI Sbjct: 177 IIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
BLAST of CF832477 vs. ExPASy Swiss-Prot
Match: HDA11_MOUSE (Histone deacetylase 11 OS=Mus musculus GN=Hdac11 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.470e-40 Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = -3 Query: 417 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGGYMKSSARVIANSVENLSRKGLI 863 IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+ GT EYL+K++ + + P++V+YNAGTD+LEGD LG L ISP GI RDE FR R+ +IPI+M+TSGGY K +AR+IA+S+ NL GLI Sbjct: 177 IIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLI 325 The following BLAST results are available for this feature:
BLAST of CF832477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832477 ID=CF832477; Name=CF832477; organism=Citrus sinensis; type=EST; length=865bpback to top |