CF832500

Overview
NameCF832500
Unique NameCF832500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:58..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 7.824e-74
Identity = 134/162 (82.72%), Postives = 147/162 (90.74%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            MAPIAVGD +PDG +++FDE DQLQ  SVHSLAAGKKVILFGVPGAFTPTCS+KHVPGFIEKA+ELKSK VDEI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+DDLKV  ANVESGG+FTVSSADDILKAL
Sbjct:    1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2C_ARATH (Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 6.200e-71
Identity = 128/162 (79.01%), Postives = 145/162 (89.51%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            MAPI VGD +PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVESGG+FTVSSA+DILKAL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILKAL 162          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2D_ARATH (Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.169e-69
Identity = 126/162 (77.78%), Postives = 144/162 (88.89%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            MAPI VGD +PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW KT+ ENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVE+GG+FTVSSA+DILKAL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.064e-66
Identity = 122/162 (75.31%), Postives = 141/162 (87.04%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            MAP+AVGD LPDG L +FD +D+LQQVSVH LAAGKKV+LFGVPGAFTPTCS +HVPGFI +A++LK+K VD+IL +SVNDPFVMKAWAK++PENK VKFLADG   YT ALGLELDLSEKGLG RSRRFALL D+LKV  AN+E GG FT+S A++ILKAL
Sbjct:    1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL 162          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2A_ARATH (Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.755e-49
Identity = 99/149 (66.44%), Postives = 119/149 (79.87%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGD 509
            MAPI VGD +PDG +++FD+ DQLQ VSVHSLAAGKKVILFGVPGAF PTCS+ HV GFIEKA+ELKS  VDEI+C+S +DPF++ A +    ENK VKF+ DGS +Y   LGLEL++ +KGLG RSR FALL+D+LKV   NV SGGD
Sbjct:    1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFIEKAEELKSNGVDEIICLSGDDPFMITACS----ENKHVKFVEDGSGEYIQLLGLELEVKDKGLGVRSRGFALLLDNLKVIVVNVGSGGD 145          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.660e-47
Identity = 95/164 (57.93%), Postives = 121/164 (73.78%), Query Frame = 3
Query:   66 APIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            A IAVGD LPD  L+YFD  D +L+ V+V  L AGKKV+LF VPGAFTPTC+ KHVPGF+ KA EL++K VD + C+SVND FVM+AW ++      V  L+DG+ +   A+G+ELDLS+K  GLG RSRR+ALL +D  VK  N+E GG FT SSA+++LKAL
Sbjct:   69 ATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLKAL 232          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2E_ARATH (Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.391e-46
Identity = 98/164 (59.76%), Postives = 118/164 (71.95%), Query Frame = 3
Query:   66 APIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            A I+VGD LPD  L+Y D     ++ V+V SL AGKK ILF VPGAFTPTCS KHVPGF+ KA EL+SK +D I CISVND FVM+AW K    N  V  L+DG+ ++T  LG+ELDL +K  GLG RSRR+A+L DD  VK  N+E GG FT SSA+D+LKAL
Sbjct:   71 ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLKAL 234          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PR2E2_ORYSJ (Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.372e-46
Identity = 98/166 (59.04%), Postives = 123/166 (74.10%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            +A IAVGD LPD  L+YFD  D +L+ V+V  L AG+K +LF VPGAFTPTCS KH+PGFIEKA EL +K VD I C+SVND FVM+AW ++    +  V  L+DG+ + T ALG+E+DLS+K  GLG RSRR+ALL DD  VK  N+E GG FT SSA+++LKAL
Sbjct:   60 VATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL 225          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.491e-28
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 3
Query:   78 VGDPLPDGILAYFDEQDQLQQVSV---------HSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            +G  +P+   AY     +L+   V         H    GKKV++  VPGAFTPTC+  HVP ++EK  ELKSK VDE++ IS NDPFV+ AW  T     ++ F  D + +++      LDLS KG+G R+ R+AL+ +DLKV+   ++  G+   SSA  +L  L
Sbjct:    2 IGSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.224e-26
Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  165 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDIL 539
            GKKV++FG+PGA+T  CS  HVP +    D+LK+K VD ++C+SVNDP+ +  WA+      +++F  D    +  +L LE+DLS   LG RS R++  VDD K+KA NVE +  DF VS A+ IL
Sbjct:   70 GKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVIL 195          
The following BLAST results are available for this feature:
BLAST of CF832500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2B_ARATH7.824e-7482.72Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB... [more]
PRX2C_ARATH6.200e-7179.01Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC... [more]
PRX2D_ARATH1.169e-6977.78Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID... [more]
PRX2C_ORYSJ2.064e-6675.31Peroxiredoxin-2C OS=Oryza sativa subsp. japonica G... [more]
PRX2A_ARATH1.755e-4966.44Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA... [more]
PR2E1_ORYSJ3.660e-4757.93Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa ... [more]
PRX2E_ARATH1.391e-4659.76Peroxiredoxin-2E, chloroplastic OS=Arabidopsis tha... [more]
PR2E2_ORYSJ2.372e-4659.04Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa ... [more]
MALF3_MALFU6.491e-2839.76Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PRX2F_ORYSJ1.224e-2646.03Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832500 ID=CF832500; Name=CF832500; organism=Citrus sinensis; type=EST; length=645bp
TCTCGCCCTACCCTGTTTAATCGTGTATTTAATCACAGGCGCGGATCAGA
TTCTCTCTCTAAATGGCTCCTATCGCAGTCGGTGACCCCTTGCCGGACGG
TATTCTCGCTTACTTCGACGAACAAGATCAGTTGCAGCAAGTGTCCGTAC
ACTCGCTCGCTGCCGGGAAAAAGGTCATCCTCTTTGGCGTCCCCGGTGCT
TTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGATTCATCGAGAAGGC
TGATGAGTTGAAGTCAAAAGACGTCGATGAAATTCTCTGCATAAGCGTTA
ATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGAACAAG
AGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCTTTGGG
GCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAGGAGGT
TTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTGAATCT
GGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCAAGGCTCTTTA
AATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTACTTCC
TTTTGCTGTGCTATGCTTAGGATGAATATAAACCCAGTGGATCTC
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