CF832515

Overview
NameCF832515
Unique NameCF832515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1017 contig Csv1_Contig1017:1..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832515 vs. ExPASy Swiss-Prot
Match: NUDT9_ARATH (Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.886e-57
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = -1
Query:  270 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGST--DSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNVIHQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQGGFALYKLMVEAMNN 761
            GAV+ETSDKKI++L+RSNNVGEFPGH+VFPGGHPEP   GI  H   +     E +N KV+QEMFDSI  EVVEE G+P+ SL +PLFIGISRR LNVRPA FF++KCS  S+ I +LYS+A+DG+ESTQL  VS+ EL+ M S+MPGCH GGFALY+LM++ + N
Sbjct:  137 GAVIETSDKKIIVLRRSNNVGEFPGHYVFPGGHPEPTAVGIDYHQLENNVQTGEVLNKKVTQEMFDSIICEVVEETGIPASSLSSPLFIGISRRELNVRPAMFFYLKCSHHSDDIQRLYSSAEDGFESTQLHTVSLDELKMMTSRMPGCHHGGFALYELMLQRLKN 302          
BLAST of CF832515 vs. ExPASy Swiss-Prot
Match: NUD22_HUMAN (Nucleoside diphosphate-linked moiety X motif 22 OS=Homo sapiens GN=NUDT22 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = -1
Query:  297 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTD-SEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNVIHQLY-STAQDGYESTQLFAVS------MIELENMASKMPGCHQGGFALY 761
            GA + T+D  ++ L+RS  V E PG    PGGHPEPQ       P GS    +     V  E+F S+ +E+ +E+ +P  +L  PL +GI+R   +  R +A F+++CSL S  + + Y S   + +EST +F V       ++E E  A   P   +G   LY
Sbjct:  124 GAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQ----ALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYLSGGPEAHESTGIFFVETQNVRRLLETEMWAELCPSA-KGAIILY 282          
BLAST of CF832515 vs. ExPASy Swiss-Prot
Match: NUD22_MOUSE (Nucleoside diphosphate-linked moiety X motif 22 OS=Mus musculus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.519e-14
Identity = 47/145 (32.41%), Postives = 76/145 (52.41%), Query Frame = -1
Query:  342 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ---DAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNVIHQLY-STAQDGYESTQLFAVSMIELENM 761
            GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     GI  H       +     V +E+F S+ +E+ +E+ +P  +L  PL +GI+    +  R +A F+++CSL S  +   Y S   + +EST +  V    ++ +
Sbjct:  123 GAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGGIPRH------KDLPGLLVVRELFSSVLQEICDEVNLPLHTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEEVRSYYLSGGPEAHESTGIIFVETQRVQRL 261          
BLAST of CF832515 vs. ExPASy Swiss-Prot
Match: NUD22_BOVIN (Nucleoside diphosphate-linked moiety X motif 22 OS=Bos taurus GN=NUDT22 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14
Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = -1
Query:  342 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNVIHQLY-STAQDGYESTQLFAVSMIELENM 761
            GA + T+D  ++ L+RS  V E PG    PGGHPEPQ       P      +     V  E+F S+ +E+ +E+ VP  +L  PL +GI+    +  R +A F+++CSL S  + + Y S   + +EST +  V    ++ +
Sbjct:  124 GAALATADDFLVFLRRSGQVAEAPGLVDVPGGHPEPQALCPGDSP---LHKDLPGELVVHELFSSVLQEICDEVNVPPLTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEQVRRHYMSGGPEAHESTGIIFVEKQSMQRL 262          
BLAST of CF832515 vs. ExPASy Swiss-Prot
Match: NUD22_RAT (Nucleoside diphosphate-linked moiety X motif 22 OS=Rattus norvegicus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = -1
Query:  342 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNVIHQLY-STAQDGYESTQLFAVSMIELENM 761
            GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     S P      +     V +E+F S+ +EV +E+ +P  +L  PL +GI+    +  R +A F+++CSL S  +   Y S   +  EST +  V    ++ +
Sbjct:  123 GAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGSIP---QHEDLPGELVVRELFSSVLQEVCDEVNLPLHTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEEVRNYYLSGGPEANESTGIIFVETQRVQRL 261          
The following BLAST results are available for this feature:
BLAST of CF832515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NUDT9_ARATH6.886e-5764.46Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9... [more]
NUD22_HUMAN7.702e-1634.15Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_MOUSE5.519e-1432.41Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_BOVIN9.415e-1432.39Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_RAT1.230e-1333.10Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01P16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832515 ID=CF832515; Name=CF832515; organism=Citrus sinensis; type=EST; length=761bp
TTTTTTTTTTTTTTTGGATAATATAATCAATTAACTCACTACACCCTTTC
AGGAATTTTGATGAAAACAGTCACGTGCTTCAATTACCTTAGAGAAATCA
ATGCAATTGCATAATCATGCCTATATCATGTGTTGATTAACTATACTTTT
TAGAGAAAGACTCTAGTACGTCTCAATTAATTCTGCTGTTTATCAACTAT
AATGTAAAATATTAGTGGAGGAAAAGCAAAGCCGCAGACTGCCATGGACT
CTCATGAATTTTATGGTATATTATTCATAGCTTCTACCATCAGCTTATAA
AGAGCAAATCCACCTTGATGGCAGCCAGGCATTTTAGACGCCATGTTCTC
CAACTCAATCATTGAAACTGCAAAAAGTTGGGTTGATTCATAGCCATCTT
GTGCGGTAGAATACAGCTGGTGAATTACGTTTGACTGAAGACTGCATTTT
ATGAAGAAAAAAGCAGCTGGTCTAACATTCAAACGCCTGCGGGATATACC
AATGAAAAGTGGGTTGCAAAGAGATTCTGAAGGTACTCCAATTTCTTCAA
CCACTTCGCGAGTAATGCTGTCAAACATTTCTTGAGAAACCTTGTGGTTT
ATAAACTCAGAGTCTGTTGACCCACACGGATGAGATGTAATTCCAGCATC
TTGGGGCTCTGGATGGCCTCCTGGAAAGACAAAGTGCCCAGGAAATTCGC
CAACATTATTACTTCTTTGCAACAAGAGTATTTTCTTGTCAGATGTCTCT
ACCACTGCACC
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