CF832519

Overview
NameCF832519
Unique NameCF832519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2855 contig Csv1_Contig2855:49..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.756e-46
Identity = 95/236 (40.25%), Postives = 147/236 (62.29%), Query Frame = 1
Query:   82 VGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAENAKSFDEIEFEKLLRKKFARRDEEYDSML 789
            +G  ++ TG  L R GC++QG+Y + E+L+RH  L    D AP+V +  F+AP+ASIIGDV +G+ SSIWY  VLRGDVNSI IG  T + D ++VH + +   G   PT IGD V +G  +++H  T+  E+F+G G+TL DG  VEK+  + AG+L+     I  GE WGG+PA+F+R++T+++ + + +      NL+  H  + +KS  E+  +  L +K+ +     D +L
Sbjct:   10 LGEVVKNTGLILHRTGCKMQGDYAYVEKLNRHTRLTAFGDNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLGP-KPTQIGDKVYIGPGSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIRQVTKDDESQLEKIIEQNINLSEQHEKQTSKSAKELNND--LLQKYVKNRTRSDHIL 242          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii GN=MJ0304 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 72/158 (45.57%), Postives = 106/158 (67.09%), Query Frame = 1
Query:  211 VVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 684
            +++K+V +A  A I+GDV +G  SS+WY  V+RGDV+ I IG+ +NIQD  +VH +K        PTIIGD V++GH AV+HGC +ED   VGM AT+L+G  + ++ ++ A ALV QN +IP   +  G P R +R+LTEEE+  I ++A+ Y  L+
Sbjct:    1 MISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKG------YPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLS 152          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.221e-31
Identity = 69/165 (41.82%), Postives = 104/165 (63.03%), Query Frame = 1
Query:  208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAE 702
            P V  D ++AP+  + G V V  GSS+W G VLRGD+N I++G  +N+Q+  +VH A S+  G    TII   VTVG  ++L  CT+E E  +G  + L++G  VE  +++ AG++V    +IP GE+WGGNPARF+R LT EE   I + A+  ++L+  + +E
Sbjct:   66 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 230          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.641e-31
Identity = 67/165 (40.61%), Postives = 104/165 (63.03%), Query Frame = 1
Query:  208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAE 702
            P V  D ++AP+  + G V V  GSS+W G VLRGD+N I++G  +N+Q+  +VH A S+  G    T+I   VTVG  ++L  CT+E E  +G  + L++G  VE  +++ AG+++    +IP GE+WGGNPARF+R LT EE   I + A+  ++L+  + +E
Sbjct:   70 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 234          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.008e-30
Identity = 69/159 (43.40%), Postives = 101/159 (63.52%), Query Frame = 1
Query:  199 DKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA-KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINY 672
            D  P + + V +  S+ +IGDV++     IW   V+RGDV+ + IG+ TNIQD S++HV  KS+      P  IG++VTVGH  +LHGCT+ +   VGMG+ LLDG  VE   M+ AG+LV QN ++  G ++ G+P + +R L++EE A +  SA NY
Sbjct:   10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.008e-30
Identity = 69/159 (43.40%), Postives = 101/159 (63.52%), Query Frame = 1
Query:  199 DKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA-KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINY 672
            D  P + + V +  S+ +IGDV++     IW   V+RGDV+ + IG+ TNIQD S++HV  KS+      P  IG++VTVGH  +LHGCT+ +   VGMG+ LLDG  VE   M+ AG+LV QN ++  G ++ G+P + +R L++EE A +  SA NY
Sbjct:   10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.410e-29
Identity = 62/160 (38.75%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  223 DVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAE 702
            D ++APSA++IG V++  G+S+W+G VLRGD   I IG  +N+QD S++H           P  +G  VTVGH+A+LHGC+V D + VG+ A +L+G  + K+ ++ A AL+ +  +IP G +  G+P + +R+L+E +   +  SA +Y + AR +A +
Sbjct:   15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMG------YPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYARD 168          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: PAAY_ECOLI (Phenylacetic acid degradation protein paaY OS=Escherichia coli (strain K12) GN=paaY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.107e-24
Identity = 63/191 (32.98%), Postives = 106/191 (55.50%), Query Frame = 1
Query:  208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA-----RVHAAENAKSFD----EIEFEKLLRKK 753
            PVV ++ F+ P+A +IGDV +G+G  +     LRGD   I +  G NIQDN ++H            T++G++  +GHSA+LHGC +   A VGM A ++DG  + ++++V A A V+   ++P   +  G+PA+ +R+L+E+E+A+  Q    Y  L       +H  E  +  +     + F++ LR K
Sbjct:   11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQ------DTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRKRLVFDENLRPK 195          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: YTOA_BACSU (Uncharacterized transferase ytoA OS=Bacillus subtilis GN=ytoA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.088e-23
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEE 639
            P ++   F+A +A+I GDV +G  SSIW+  V+RGDV    IG+  NIQD S +H + +         +I D+ T+GH   LH   +   A +GMG+ +LDG  + + A + AG+LV     IP G +  G PA+ +R LTEE+
Sbjct:   10 PDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKTL------LIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEED 147          
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_SALTY (Carnitine operon protein caiE OS=Salmonella typhimurium GN=caiE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21
Identity = 57/159 (35.85%), Postives = 93/159 (58.49%), Query Frame = 1
Query:  208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 684
            PVV+ D F+ PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            TI+ +N  +GH A+LHGC V  +A VGM + ++DG  + + ++VAA + V+   +    ++  G+PAR LR++T++E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKHLNTKEYQDLA 163          
The following BLAST results are available for this feature:
BLAST of CF832519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
Y2881_DICDI1.756e-4640.25Uncharacterized protein DDB_G0288155 OS=Dictyostel... [more]
Y304_METJA5.858e-3445.57Uncharacterized protein MJ0304 OS=Methanocaldococc... [more]
UMP7_ARATH1.221e-3141.82Uncharacterized protein At5g63510, mitochondrial O... [more]
UMP8_ARATH4.641e-3140.61Uncharacterized protein At3g48680, mitochondrial O... [more]
YRDA_SHIFL3.008e-3043.40Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=... [more]
YRDA_ECOLI3.008e-3043.40Protein yrdA OS=Escherichia coli (strain K12) GN=y... [more]
Y3753_PSEAE7.410e-2938.75Uncharacterized protein PA3753 OS=Pseudomonas aeru... [more]
PAAY_ECOLI1.107e-2432.98Phenylacetic acid degradation protein paaY OS=Esch... [more]
YTOA_BACSU2.088e-2338.89Uncharacterized transferase ytoA OS=Bacillus subti... [more]
CAIE_SALTY1.146e-2135.85Carnitine operon protein caiE OS=Salmonella typhim... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832519 ID=CF832519; Name=CF832519; organism=Citrus sinensis; type=EST; length=862bp
GGCCCCTTCTCTGTAATCGAAGATCTTTGATTTGATTCTGAGCTGACAGC
GATGGGAACGCTGGGGAAAGCAATATACAGCGTTGGATTCTGGATCCGTG
AAACCGGTCAAGCCCTTGATCGTCTCGGTTGCCGCCTCCAAGGCAACTAC
TACTTCCAAGAACAGCTCTCCAGGCATCGAACACTCATGAACATTTTTGA
CAAAGCTCCTGTTGTTAACAAGGATGTATTTTTGGCTCCTAGTGCATCTA
TCATTGGTGATGTTCAGGTGGGCCGAGGTTCTTCCATTTGGTATGGATGT
GTTTTGAGAGGTGATGTTAACAGCATCAGCATTGGATCAGGAACCAATAT
ACAAGACAATTCCCTTGTTCATGTGGCAAAATCAAATTTAGCTGGGAAGG
TTTTACCTACTATCATTGGAGATAATGTTACTGTTGGTCACAGTGCTGTC
TTGCATGGATGTACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCTAC
TTTGCTGGATGGTGTTTATGTTGAGAAACATGCTATGGTTGCTGCTGGAG
CTCTTGTAAGGCAGAACACAAAGATTCCATGTGGGGAGGTTTGGGGAGGT
AATCCAGCTAGGTTCCTCAGAAAGCTCACAGAAGAAGAGATGGCCTTTAT
TTCCCAGTCAGCCATAAATTATTCCAATTTGGCACGGGTTCACGCAGCTG
AAAATGCGAAGAGCTTTGACGAAATTGAGTTTGAGAAGCTGCTTCGCAAG
AAATTTGCTCGTCGTGATGAGGAGTATGATTCAATGCTTGGTGTTGTTCG
CGAAACCCCTGCTGAGCTCATACTTCCTGATAACGTGATGCAAGATAAAG
TGCCAAAAACAG
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