CF834683

Overview
NameCF834683
Unique NameCF834683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.013e-26
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = -1
Query:  570 SKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 803
            +KGQ +  QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS   M+SDAE WNGR AMLGLVALAFTEFVKG +LV
Sbjct:  119 AKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.864e-23
Identity = 48/76 (63.16%), Postives = 67/76 (88.16%), Query Frame = -1
Query:  570 GQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 797
            G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALAFTE+VKGG L+
Sbjct:  122 GRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.083e-23
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = -2
Query:  251 QELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELNPPSGAKSTEL-PNGAAATK 481
            +E+IPFFQ+ATL K+CT+VQKCYIEL+KQVK KLG +D YFIKLADAMVTW+EAWDE+N     ++T    +  AATK
Sbjct:  287 EEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINNNKSEETTSTKASEVAATK 364          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.061e-22
Identity = 50/74 (67.57%), Postives = 61/74 (82.43%), Query Frame = -2
Query:  260 QELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELNPPSGAKSTELPNGAA 481
            +E+IPF QSATLPK+CT+VQ+CY+EL+KQVK KL  +D YF KLADAMVTWIEAWDELN P+G    +LP+  A
Sbjct:  288 EEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELN-PTGEGLAKLPSRTA 360          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.023e-21
Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = -2
Query:  305 N*ISISQELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELN 499
            N I   +E+IPFFQ+ATLPKECTTVQ+CY+EL+KQVK KL  +D YF KL +AMVTWIEAWDELN
Sbjct:  278 NGIFWQEEIIPFFQAATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.887e-21
Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = -2
Query:  290 QELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELNPPSGA 481
            +++IPFFQ+ T+PK+C TVQKCYI L+ QVK KLG +D YF+KL DAMVTWIEAWDELNP + A
Sbjct:  294 EDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELNPSTPA 357          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.607e-17
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = -1
Query:  570 GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 764
            G+AWFL T+ + +VASL+PL +G SVESKS G  ++DAELWNGRFAMLGLVALA TEF+ G   V
Sbjct:  165 GLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = -1
Query:  570 KGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 800
            +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAMLGLVALA TE + G   +
Sbjct:   93 RGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of CF834683 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = -1
Query:  582 KGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 800
            +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G
Sbjct:   88 RGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
The following BLAST results are available for this feature:
BLAST of CF834683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ELI_PEA4.013e-2675.64Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL1.864e-2363.16Desiccation stress protein DSP-22, chloroplastic O... [more]
UPTG_PEA7.083e-2365.38Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG2_SOLTU2.061e-2267.57Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
UPTG1_SOLTU1.023e-2172.31Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG_MAIZE3.887e-2168.75Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
ELI5_HORVU2.607e-1766.15High molecular mass early light-inducible protein ... [more]
ELI9_HORVU1.211e-1451.28Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU2.698e-1452.70Low molecular mass early light-inducible protein H... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834683 ID=CF834683; Name=CF834683; organism=Citrus sinensis; type=EST; length=803bp
TTCCGAAAAAATAATAATCATAATAATCTCCATTAACGTCCAATGAAACA
AGCTAACACTCAACCTAGTCAATACATAAACTCGACGCTTGCTTATTGTT
CTAAACTCAATAACATTGTAATAAATAAAATTATACCCCTCCGATCTGCA
AAATAAATATTCCAAGCCCCGAAGCAGAAGCTCGAACAAATGGCTGTGAA
CTGTGTCTATGACTATCAAAAGGGATGATAAATGTTGATCAAGTAATCTA
TTTTGTAGCAGCAGCACCGTTAGGCAACTCTGTGGATTTTGCTCCAGATG
GTGGGTTCAGTTCATCCCATGCTTCGATCCATGTGACCATTGCGTCGGCC
AGCTTGATGAAGTATTCATCAACCTTACCAAGTTTTGCCTTAACTTGCTT
GGCCAGTTCAATGTAGCACTTCTGCACGGTGGTGCATTCCTTTGGAAGTG
TGGCAGATTGGAAGAATGGGATCAGCTCTTGAGAAATAGAGATTTAATTA
CAGTAGGATCTCATACATTAATTAGTTAAAAAAAATACAGATCTACAGAT
CTAAACAAAATTAAGCTTAAACAAGGGTGCCACCCTTAACAAACTCGGTG
AAAGCCAAAGCAACAAGGCCCAGCATAGCAAACCTCCCATTCCACAACTC
AGCATCCGAAGTCATGAACCCATCCGATTTAGACTCCACGCTGACACCTT
TAAACAAAGGAACCAGGGACGCAACCGTGAGCAAAACACTGGTCCCCAAG
AACCAGGCAACCCCACCGTCTGATAACTGGGCAAACACATCCTGACCCTT
GGA
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