CF834688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 6.417e-72 Identity = 138/205 (67.32%), Postives = 159/205 (77.56%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPKTD-----KDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 PFY+ EI K+ S AKLIIT A YVD+L D +DF V+T+D PPENCLHF+VLSEA+E +PEV I PDD VA+PFSSGTTGLP+GV+LTHKSL TSVAQQVDGENPNLYLT DV+LCVLPLFHI+S+NSVLLC+LRAG+ VLLM KFEIG LLELI R+R KNPMVAD+DLSS+R+VLSGAA Sbjct: 124 PFYTAPEIFKQFTVSKAKLIITQAMYVDKLRNHDGAKLGEDFKVVTVDDPPENCLHFSVLSEANESDVPEVEIHPDDAVAMPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGTLLELIQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAA 328
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.529e-62 Identity = 130/203 (64.04%), Postives = 151/203 (74.38%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPKTDKDFTVITIDAP-PENCLHFTVLSEADEDQIPE--VAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 PFY+ E+ K++++SGAKLIIT +QYVD+L ++ T+IT D P PENCL F+ L DE + V I DD ALPFSSGTTGLP+GVVLTHKSLITSVAQQVDG+NPNLYL + DV+LCVLPLFHIYS+NSVLL SLR+GA VLLMHKFEIGALL+LI R+R KNP V YDLSSVR VLSGAA Sbjct: 132 PFYTSQELYKQLKSSGAKLIITHSQYVDKLKNLGENLTLITTDEPTPENCLPFSTLITDDETNPFQETVDIGGDDAAALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGDNPNLYLKSNDVILCVLPLFHIYSLNSVLLNSLRSGATVLLMHKFEIGALLDLIQRHRVTIAALVPPLVIALAKNPTVNSYDLSSVRFVLSGAA 334
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 7.862e-62 Identity = 117/202 (57.92%), Postives = 153/202 (75.74%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPKT--DKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 P ++ +E++K+ + S AK+I+T A +V+++ + D +I ID+ PE CLHF+VL++A+E IPEV I+PDD VALP+SSGTTGLP+GV+LTHK L+TSVAQQVDGENPNLY+ + DV+LCVLPLFHIYS+NSVLLC LR GA +L+M KF+I + LELI RY+ K+PMV DYDLSSVR V+SGAA Sbjct: 109 PLFTPAEVVKQAKASSAKIIVTQACHVNKVKDYAFENDVKIICIDSAPEGCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVSFLELIQRYKVTIGPFVPPIVLAIAKSPMVDDYDLSSVRTVMSGAA 310
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.483e-60 Identity = 117/202 (57.92%), Postives = 148/202 (73.27%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPKTDK-DFTVITID-APPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 PFY EI K+ + +GA++I+T+A YV++L D VITID AP E C H +VL+EADE Q P V I PDD VALP+SSGTTGLP+GV+LTHK L++SVAQQVDGENPNLY + DV+LCVLPLFHIYS+NSVLLC+LRAGA L+M KF + LELI +Y+ K+P+V+ YD+SSVR+++SGAA Sbjct: 109 PFYKPGEIAKQAKAAGARIIVTLAAYVEKLADLQSHDVLVITIDDAPKEGCQHISVLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLIMQKFNLTTCLELIQKYKVTVAPIVPPIVLDITKSPIVSQYDVSSVRIIMSGAA 310
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.141e-59 Identity = 112/202 (55.45%), Postives = 150/202 (74.26%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 PF++ +E++K+++ S AKLIIT A YVD++ +K+ +I ID P++CLHF+ L EADE ++PEV I DD VALP+SSGTTGLP+GV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYS+N+VL C LRAG +L+M KF+I LELI +Y+ K+P+V YDLSSVR V+SGAA Sbjct: 110 PFFTSAEVIKQLKASQAKLIITQACYVDKVKDYAAEKNIQIICIDDAPQDCLHFSKLMEADESEMPEVVINSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAA 311
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.770e-59 Identity = 112/202 (55.45%), Postives = 150/202 (74.26%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 PF++ +E++K+++ S AKLIIT A YVD++ +K+ +I ID P++CLHF+ L EADE ++PEV I DD VALP+SSGTTGLP+GV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYS+N+VL C LRAG +L+M KF+I LELI +Y+ K+P+V YDLSSVR V+SGAA Sbjct: 110 PFFTSAEVIKQLKASLAKLIITQACYVDKVKDYAAEKNIQIICIDDAPQDCLHFSKLMEADESEMPEVVIDSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAA 311
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.770e-59 Identity = 111/202 (54.95%), Postives = 150/202 (74.26%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 P ++ +E++K+ + S AK+IIT + +V ++ ++ D VI ID+ PE CLHF+ L+++DE +IPEV I+PDD VALP+SSGTTGLP+GV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYS+NS+LLC LR GA +L+M KF+I LELI +Y+ K+P+V YDLSSVR V+SGAA Sbjct: 114 PLFTPAEVVKQAKASSAKIIITQSCFVGKVKDYASENDVKVICIDSAPEGCLHFSELTQSDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHIYSLNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSIGPFVPPIVLAIAKSPIVDSYDLSSVRTVMSGAA 315
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 8.995e-58 Identity = 121/216 (56.02%), Postives = 151/216 (69.91%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPKT------------DKDFTVITID---APPENCLHF-TVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 PF + EI K+ + SG KLI+T + YVD+L + D TVITID A PE CL F ++++ADE +PEVAI PDDPVALPFSSGTTGLP+GVVLTH+S+++ VAQQVDGENPNL++ GDV LCVLPLFHI+S+NSVLLC++RAGA V LM +FE+GA+L I R+R KNP V +DLSS+R+VLSGAA Sbjct: 125 PFCTPQEIHKQFKASGVKLILTQSVYVDKLRQHEAFPRIDACTVGDDTLTVITIDDDEATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGVAQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAIERWRVTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAA 340
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.004e-57 Identity = 107/202 (52.97%), Postives = 149/202 (73.76%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 P ++ +E++K+ + S AK++IT A + ++ + D VI +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLP+GV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYS+NSVLLC+LR GA +L+M KF+I LELI +++ K+P+V +YDLSSVR V+SGAA Sbjct: 112 PLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSAPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVHNYDLSSVRTVMSGAA 313
BLAST of CF834688 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 2.617e-57 Identity = 107/202 (52.97%), Postives = 149/202 (73.76%), Query Frame = 1 Query: 1 PFYSFSEILKRVRTSGAKLIITMAQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPRGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSMNSVLLCSLRAGAGVLLMHKFEIGALLELILRYRXXXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAA 600 P ++ +E++K+ + S AK++IT A + ++ + D VI +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLP+GV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYS+NSVLLC+LR GA +L+M KF+I LELI +++ K+P+V +YDLSSVR V+SGAA Sbjct: 112 PLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSVPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVDNYDLSSVRTVMSGAA 313 The following BLAST results are available for this feature:
BLAST of CF834688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834688 ID=CF834688; Name=CF834688; organism=Citrus sinensis; type=EST; length=600bpback to top |