CF834702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834702 vs. ExPASy Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17 Identity = 47/96 (48.96%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 8 RGLVVLSLLAGIAPVREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPR 295 + + +L+ L+ + R+AIV E GI LVE ++ GS +GKE A LLQLC S K L+++EG IPPLVALSQ+G+ RAK KA+ LL + R R Sbjct: 656 KAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQR 751
BLAST of CF834702 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 8 RGLVVLSLLAGIAPVREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ 298 + +VVL+ LA + + AI EE GI LVE +E GS +GKE A LLQLC S K ++REG IPPLVAL+++G+ R K KA+ LL Y + RQ Sbjct: 605 KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQ 701
BLAST of CF834702 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.166e-14 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 8 RGLVVLSLLAGIAPVREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETL 271 + + VL+ LA I R AI +E GI LVE +E GS +GKE A LLQL S + ++++EG +PPLVALSQ+G+ RA+ K +TL Sbjct: 724 KAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKVQTL 811 The following BLAST results are available for this feature:
BLAST of CF834702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834702 ID=CF834702; Name=CF834702; organism=Citrus sinensis; type=EST; length=574bpback to top |