CF834723

Overview
NameCF834723
Unique NameCF834723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7569 contig Csv1_Contig7569:684..1033. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.391e-18
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 YPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVY 228
            YPYA+F CH      + +  SL G +G  VEAVAVCH DTS W+ +HA+F VLG++PG+  VCHF Q D +V+
Sbjct:  509 YPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581          
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.525e-16
Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 1
Query:   10 YPYAIFYCHSQMTE-NKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVY 228
            YPYA+F CH  +TE  + +  SL G +G  VEAVAVCH DT+ W+  HA+F+VLG++PG+  VCHF Q D +V+
Sbjct:  249 YPYAVFMCH--LTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320          
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.984e-15
Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 1
Query:   10 YPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVY 228
            YP+A+FYCH  M    ++ V L G+NG R +AVAVCH +TS W+ +H +F+VL ++PG+  VCHF    ++V+
Sbjct:  318 YPFAVFYCHKAMMTT-VYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.481e-14
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 1
Query:    7 PYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVY 228
            PY YA+F CH      + + VS+ G +G  VEAVAVCH DT+ W+  H +F+VL ++PG+  VCHF   D++V+
Sbjct:  353 PYAYAVFACHLTRA-TRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425          
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: BURPB_ORYSJ (BURP domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=BURP11 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.268e-12
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query:    4 MPYPYAIFYCHSQMTENK----LFGVSLGGDNGD-------RVEAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVYIP 234
            + YPYA+FYCHS          L   + G  +G+       ++EA+AVCH+DTS W  D+  F   G++PG   VCHF    +IV++P
Sbjct:  230 LTYPYAVFYCHSTKPTAAYAVTLVAATTGDGDGEGEAASPAKMEALAVCHLDTSRWRADNPFFVAHGVKPGEVSVCHFLTKLSIVWVP 317          
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.986e-12
Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 1
Query:    4 MPYPYAIFYCHSQMTENKLFGVSL-GGDNGDRV--EAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVYIPAPT 243
            M YPY +F+CH+   + +L+ VSL  G++G  +    +AVCH +TS W   H  F  + ++PG +  CHFF   +I+++P P+
Sbjct:  428 MLYPYKVFFCHTPK-QTRLYQVSLVSGESGRPLIDGLLAVCHQNTSDWDTGHPFFHFMDVKPGETTACHFFGRGSIIWVPVPS 509          
BLAST of CF834723 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.614e-11
Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 1
Query:   10 YPYAIFYCHSQ------MTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFRVLGIEPGSSHVCHFFQADNIVY 228
            YPY ++ CH+       M E +  G   GGD G+ V    VCH +TS W+ +H SF++LG +PG S VCH     +IV+
Sbjct:  328 YPYTVYRCHTTGPARAYMVEMEGDG---GGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVW 403          
The following BLAST results are available for this feature:
BLAST of CF834723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BURPH_ORYSJ8.391e-1852.05BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP5_ORYSJ3.525e-1652.70BURP domain-containing protein 5 OS=Oryza sativa s... [more]
RD22_ARATH2.984e-1546.58Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ1.481e-1445.95BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURPB_ORYSJ5.268e-1238.64BURP domain-containing protein 11 OS=Oryza sativa ... [more]
BURP9_ORYSJ8.986e-1237.35BURP domain-containing protein 9 OS=Oryza sativa s... [more]
BURPD_ORYSJ2.614e-1140.51BURP domain-containing protein 13 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06A07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834723 ID=CF834723; Name=CF834723; organism=Citrus sinensis; type=EST; length=350bp
ATCATGCCTTACCCTTATGCAATCTTCTACTGCCACAGCCAAATGACTGA
GAACAAGTTATTCGGTGTTTCATTAGGTGGTGATAATGGAGATAGAGTGG
AAGCTGTAGCAGTTTGCCACATGGATACGTCTCATTGGAGTCGAGATCAT
GCATCGTTTCGTGTGCTTGGGATCGAGCCAGGGAGCTCCCATGTCTGCCA
TTTCTTCCAGGCTGATAATATTGTATACATTCCAGCACCTACCTACCATG
ATTAAAAATGTATTGGTAATGTGACTGTTAAAGCCATATGTATAGCGTAT
AATAATAAATCTTACTGGTAATAAATGATTTTCGAAAAAAAAAAAAAAAA
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