CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.285e-45
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDKTNN+L+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   22 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.285e-45
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDKTNN+L+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   22 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.008e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDK NN+L+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   22 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.426e-44
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   23 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.426e-44
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   23 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44
Identity = 89/95 (93.68%), Postives = 94/95 (98.95%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   23 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44
Identity = 89/95 (93.68%), Postives = 94/95 (98.95%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   23 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 2.455e-42
Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFI ++PDK+N +LSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct:   22 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 116          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.206e-42
Identity = 86/95 (90.53%), Postives = 91/95 (95.79%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDAQPELFI ++PDKTN +LSIIDSG+GM KADLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct:   27 NTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVS 121          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.660e-39
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA-DVS 703
            NTFYSNKEIFLRELISN+SDALDKIRFESLTDKS ++AQPELFI ++PDK + +LSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGA DVS
Sbjct:   32 NTFYSNKEIFLRELISNASDALDKIRFESLTDKSNVNAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGATDVS 127          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP83_ARATH5.285e-4596.84Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH5.285e-4596.84Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP80_SOLLC2.008e-4495.79Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP81_ORYSJ3.426e-4494.74Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI3.426e-4494.74Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ4.474e-4493.68Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ4.474e-4493.68Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP81_ARATH2.455e-4291.58Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI3.206e-4290.53Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE5.660e-3985.42Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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