CF834731

Overview
NameCF834731
Unique NameCF834731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:13..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.682e-66
Identity = 123/140 (87.86%), Postives = 131/140 (93.57%), Query Frame = -1
Query:  247 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 666
            DAGGIILLFQDD+VSGLQLLKDDQW+DVPPMKHSIVINLGDQLEVITNGKYKSVLHRV+AQT+G RMSIASFYNPG+DAVIYPAPALVEKE    +VYPKFVF+DYMKLYA LKFQAKEPRFEAMK +E  VNLGPIATV
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAKEPRFEAMKAVEANVNLGPIATV 318          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.574e-64
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = -1
Query:  247 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 666
            DAGGIILLFQD++VSGLQLLKD +W+DVPPMKHSIVIN+GDQLEVITNGKYKSV+HRVIAQ +GNRMSIASFYNPGSDAV+YPAPALV+KE     QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK ME  VNLGPIAT+
Sbjct:  179 DAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMENAVNLGPIATI 319          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.056e-64
Identity = 122/141 (86.52%), Postives = 131/141 (92.91%), Query Frame = -1
Query:  247 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 666
            DAGGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKEA  N QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK MET V + PIATV
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.473e-62
Identity = 118/141 (83.69%), Postives = 129/141 (91.49%), Query Frame = -1
Query:  247 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 666
            DAGGIILLFQDD+VSGLQLLKDDQW+DVPPM+HSIVINLGDQLEVITNGKYKSV HRVIAQT+G RMS+ASFYNP SDAVIYPAPALVE++A  N Q+YPKFVF+DYMKLYA LKFQAKEPRFEAMK ME  V + P+ATV
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAKEPRFEAMKAMEADVKIDPVATV 319          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.513e-62
Identity = 119/140 (85.00%), Postives = 129/140 (92.14%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGG+ILLFQDD+VSGLQLLKD QW+DVPPM+HSIVINLGDQLEVITNGKY+SV HRVIAQT+G RMSIASFYNPGSDAVIYPAP LVEKEA   +QVYPKFVFEDYMKLYAGLKFQ KEPRFEAMK +ET ++L PIAT
Sbjct:  179 DAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKLYAGLKFQPKEPRFEAMKAVETNISLVPIAT 318          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.598e-62
Identity = 119/141 (84.40%), Postives = 126/141 (89.36%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVN--SQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKSVLHRVIAQT+G RMS+ASFYNPGSDAVIYPAP LVEKEA     QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK  E  V   PIAT
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAREADVKSDPIAT 319          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.127e-61
Identity = 116/141 (82.27%), Postives = 129/141 (91.49%), Query Frame = -1
Query:  247 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNME-TIVNLGPIATV 666
            DAGG+ILLFQDD+VSGL +LKD +WVDVPPM HSIVINLGDQLEVITNGKYKSV+HRVIAQ +GNRMSIASFYNPG+DAVIYPAPALVE E   +++YPKFVF+DYMKLY GLKFQAKEPRFEAMK ME T +N+GPIATV
Sbjct:  180 DAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAKEPRFEAMKAMESTNLNMGPIATV 320          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.084e-61
Identity = 115/131 (87.79%), Postives = 124/131 (94.66%), Query Frame = -1
Query:  277 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNS-QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 666
            DAGGIILLFQDD+VSGLQLLKD+QW+DVPPM+HSIV+NLGDQLEVITNGKYKSVLHRVIAQT+G RMS+ASFYNPGSDAVIYPA  LVEKEA  S QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK ME+
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMES 309          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.012e-60
Identity = 116/139 (83.45%), Postives = 121/139 (87.05%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD  WVDVPPMKHSIV+NLGDQLEVITNGKYKSV+HRVIAQT+GNRMSIASFYNPGSDAVIYPAP LVEKE    + YPKFVFEDYM LY  LKFQ KEPRFEAMK MET    GPI T
Sbjct:  185 DAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEKEPRFEAMKAMET---TGPIPT 320          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.600e-59
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV--NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD VSGLQLLKD++W+DVPPM+HSIV+N+GDQLEVITNGKYKSV+HRV+AQT GNRMSIASFYNPGSDAVI+PAP LVEKEA     + YPKFVFEDYMKLY   KF+AKEPRFEAMK M+ +++  PI T
Sbjct:  177 DAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFVFEDYMKLYVRQKFEAKEPRFEAMKTMDAVISSQPIPT 317          
The following BLAST results are available for this feature:
BLAST of CF834731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
ACCO_DIOKA1.682e-6687.861-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_ACTDE1.574e-6485.821-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO1_PETHY2.056e-6486.521-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO4_PETHY1.473e-6283.691-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO_PRUMU2.513e-6285.001-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO3_PETHY5.598e-6284.401-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO3_CUCME2.127e-6182.271-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO1_SOLLC8.084e-6187.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_DIACA4.012e-6083.45Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_DENCR2.600e-5977.301-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834731 ID=CF834731; Name=CF834731; organism=Citrus sinensis; type=EST; length=666bp
TTTTTTTTTTTTTTTTTATGAGGCCAATATAATCTTATATAATTTCATCT
GAAACAGGAGGAATACAGTATTCCATTTGGTCACTTTCTACAATAAATAC
CTGAAACACCACGACCACCGTCGACTTTGACTCCACAAGAACTATGATCA
GTCCGAGCTTTCGGCTTATTTTAAAAACTATATATGTTCCACACTAGCCA
ACACAAACAACTCAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACA
GTTGCAATAGGACCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTC
AAACCTTGGCTCCTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGT
AATCCTCGAACACAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTC
TCCACCAATGCTGGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTA
AAATGATGCTATGGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGAT
GTAGCACACTCTTGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCG
AGGTTGATGACAATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTC
ATCTTTGAGCAGCTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGA
TGATGCCACCAGCATC
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