CF834757

Overview
NameCF834757
Unique NameCF834757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9911 contig Csv1_Contig9911:60..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834757 vs. ExPASy Swiss-Prot
Match: Y5848_ARATH (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.982e-16
Identity = 57/146 (39.04%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  126 NGAAPEKAPATATNFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRRVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG--DSAAAQTVGTGCVLCLETEDXXXXXXXXXXXXXXXXXXXXXXXXXCCGERVGKVKDPYGFTWL 557
            NGA P +   T   FT  K  LLVEA K  DAV FYK+AFGA+E G  +  KRK +QELP +  ++L +AGS+F+V DVS     + A++ G+G    L T+D                           G + GKV DP+G TW+
Sbjct:   12 NGAGPVE---THLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE--LGFK-GKVTDPFGVTWI 151          
The following BLAST results are available for this feature:
BLAST of CF834757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5848_ARATH5.982e-1639.04Uncharacterized protein At5g48480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06B03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834757 ID=CF834757; Name=CF834757; organism=Citrus sinensis; type=EST; length=769bp
CTCTTCTTCTCCCTTTTTCGTTTTCTCTCTCTTTCTCTCTCTTTCTCTCT
CCCATGGTCAGGTTTCTTTCCTTTGTCTAGACTCCAACACTCTCTCGCTC
AATGGCTGATGTCCAGGAGGTTCAGAATGGAGCTGCGCCGGAGAAGGCTC
CTGCCACCGCGACCAACTTCACGGGGATGAAGCCGCAGTTGCTTGTGGAA
GCACCGAAGGCTACTGACGCTGTTCAGTTCTACAAGACCGCGTTTGGTGC
TGTGGAGATCGGCCGTAGAGTGGAAACCAAACGCAAGGCTGAACAGGAGC
TCCCACTCATCTCCTGCGCTCAACTGGAGATTGCCGGCTCCACCTTCCTT
GTCTCTGACGTTTCCGGTGACTCTGCTGCTGCACAGACCGTGGGGACCGG
ATGCGTGCTTTGCTTGGAGACCGAGGACGTGGAGGCTGCCGTCGCCAAGG
CTGTGAGTGCTGGAGCTGTTGCTGAGGGTGAGCTCGCTGAAGGCAACGGC
GCGTGTTGTGGAGAGCGCGTGGGAAAGGTCAAAGATCCTTATGGCTTCAC
TTGGCTCATTTGCTCCCCGGTCAAGAAGTGCGCTGGCGTGGAAGCTTAAG
AGCCGCCTGATCTGATGATCTTTAGATATTGATCTACTATCACATAACTC
TCTTTTGTCGTTCGTCTTTACTGCTGTGGGTTTATAGCTCTAGGCTTTTT
TAGTATTTCGGATATCTTGATGATATTGCTGAACGTTGATCATGATGAAG
GATGTTTTTGATTAATTTT
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