CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.377e-35
Identity = 71/108 (65.74%), Postives = 81/108 (75.00%), Query Frame = -3
Query:  284 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 607
            EQMYQS CVTL +LP+PTQVYCGHEYTVKNL FALTVEP+N               A LPTIPST+EEELETNPFMRVD PE+QE +G   PI+ +RE+R +KD WRG
Sbjct:  151 EQMYQSLCVTLAALPKPTQVYCGHEYTVKNLEFALTVEPNNGKIQQKLAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKLGCKSPIDTMREVRNKKDQWRG 258          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.036e-21
Identity = 52/107 (48.60%), Postives = 64/107 (59.81%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            ++MY++    LG LP  T+VYCGHEYT+ NL FA  VEP+N                G PTIPST+ EE   NPFMRV    + E  G +DPIEA+R IRK KD +R
Sbjct:  193 DEMYKALIEVLGRLPPETRVYCGHEYTINNLKFARHVEPNNEVIRTKLAWAKEKYDNGEPTIPSTVAEEFTFNPFMRVREKSVLEHAGTSDPIEAMRSIRKEKDGFR 299          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21
Identity = 54/107 (50.47%), Postives = 64/107 (59.81%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            E+MY++    LGSL   T+VYCGHEYT+ NL FA  VEP+NV              +G PTIPSTI EE   NPFMRV    +QE  G  DPI  +  IRK KDN+R
Sbjct:  200 EEMYRALIEILGSLDPETRVYCGHEYTINNLKFARHVEPNNVSIQEKLAWAKAKYDSGEPTIPSTIAEEFTYNPFMRVREKTVQEHAGETDPIRTMGAIRKEKDNFR 306          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: HAGHL_CHICK (Hydroxyacylglutathione hydrolase-like protein OS=Gallus gallus GN=HAGHL PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.828e-20
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            EQMY +    LG LP+ T+V+CGHE TV+NL FAL VEP N                 LPT+PST++EE   NPF+RV    +Q+  G  +P+E LR +R  KDN++
Sbjct:  150 EQMYTNLTQVLGDLPKETKVFCGHECTVRNLKFALKVEPENEAVKKKLAWARQRDDEDLPTVPSTLQEEFLYNPFLRVTEEAVQKFTGRKEPVEVLRALRTEKDNFK 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.893e-19
Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            ++MY++    LG LP  T+VYCGHEYTV NL FA  VEP N                G PT+PST+ EE   NPFMRV    +Q+  G  DP+  +R IR+ KD ++
Sbjct:  199 DEMYKALLEVLGRLPPDTKVYCGHEYTVNNLKFARHVEPGNAAIQEKLAWAKEKYAIGEPTVPSTLAEEFTYNPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 305          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.778e-19
Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            E+MY +    LG LP  T+VYCGHEYT+ NL FA  VEP N               +G PTIPST+ EE   NPFMRV    +QE  G  DPI  +  IRK KD+++
Sbjct:  203 EEMYAALIEVLGRLPPETRVYCGHEYTINNLKFARHVEPCNDAIKQKLAWAKETYNSGEPTIPSTLAEEFTFNPFMRVREKSVQEHAGERDPISTMGAIRKEKDHFK 309          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 3.778e-19
Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            ++MY++    LG LP  T+VYCGHEYT+ NL FA  VEP N                G PT+PSTI EE   NPFMRV    +Q+  G  +P+  +R IRK KD ++
Sbjct:  198 DEMYKALLEVLGRLPADTRVYCGHEYTINNLKFARHVEPDNTAVREKLAWAKEKYSIGEPTVPSTIAEEFTYNPFMRVREKTVQQHAGETEPVATMRAIRKEKDQFK 304          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 46/107 (42.99%), Postives = 60/107 (56.07%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            ++MY++    LG LP  T+V CGHEYTV NL FA  VEP N                G PT+PST+ EE   NPFMRV    +Q+  G  DP+  +R IR+ KD ++
Sbjct:  199 DEMYKALLEVLGRLPPDTKVICGHEYTVNNLKFARHVEPGNTAVQEKLAWAKEKNAIGEPTVPSTLAEEFTYNPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 305          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SCHMA (Probable hydroxyacylglutathione hydrolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.455e-18
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 607
            EQM+++    L  LP  T+VYCGHEYTVKNL F LTVEP N               +   ++P TI EEL TNP MRV  P++       DPI+A++ IR+ KD +
Sbjct:  135 EQMFKALIEVLSKLPTTTKVYCGHEYTVKNLEFGLTVEPKNEALKHRLEAVKRLRASNQASVPGTIGEELATNPLMRVSEPDVLAHAKTTDPIKAMKTIREEKDRF 240          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_HUMAN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18
Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = -3
Query:  287 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 607
            ++M ++    LG LP  T+VYCGHEYT+ NL FA  VEP N                G PT+PST+ EE   NPFMRV    +Q+  G  DP+  +R +R+ KD ++
Sbjct:  198 DEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFK 304          
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2C_ARATH8.377e-3565.74Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_DANRE4.036e-2148.60Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CHICK5.271e-2150.47Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
HAGHL_CHICK5.828e-2044.86Hydroxyacylglutathione hydrolase-like protein OS=G... [more]
GLO2_MOUSE2.893e-1943.93Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_XENTR3.778e-1946.73Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_BOVIN3.778e-1943.93Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_RAT2.449e-1842.99Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_SCHMA5.455e-1844.34Probable hydroxyacylglutathione hydrolase OS=Schis... [more]
GLO2_HUMAN7.124e-1841.12Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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