CF834848

Overview
NameCF834848
Unique NameCF834848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9766 contig Csv1_Contig9766:358..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF834848 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = -1 
Query:  433 AVADCIEVIGDSIDELQDSMDE---LGHIRNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINSYAA 708
            A+ DC+E + DS+D +  S DE   L H + ++F   M +V+TWVSAALTDE TC+DG  G+ ++   K  +R  ++ VA +TSNALAL+N++AA
Sbjct:   95 AIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAA 189
The following BLAST results are available for this feature:
BLAST of CF834848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
21KD_DAUCA2.584e-1846.3221 kDa protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834848 ID=CF834848; Name=CF834848; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTTTAATATAATCACCGATTGCGTACAATCACCCATT
TTGACATAATGGATATTTAGATATACACGCACCTCCCTCGCTTGAAGCAT
CCCACACAGGCTCCCAGTTTTTCTGTGTGCAAAAGAGAATATTTTACATC
TTGCTTCTGTAATAGACATAGAAAATTACAGTAACAGTATATCACACACA
TATCAGCTTGCAATCCACGCTAGCCCTATGGCAATTTTGTCCTATACACA
TGTAAATATATCTCAAAGAAATAGGATAATTAAAACCGACCGACACTCTT
GAGTCTGACACAAATTAAGGATACGAAAATATACAGGACAACGCTATATG
AAGTAGCATGAAAGAGCGTTTCTAATTAGTGATTTAGAATGGCTTTGATC
CGATCCCTTTAGGGAGATGGAGGGTTACTGCCAGCGGCATAACTATTTAT
GAGAGCCAAGGCGTTGCTTGTCAAATGTGCAACTTTAAGAATATGCCTCC
TGATCATCGTCTTCGTATATCTGTTCAAGGGCCTACCTTGAAGCCCATCC
ACGCAAGTATCTTCATCCGTTAACGCTGCGCTTACCCATGTTTGGACATC
ACCCATTGTGAGCCAAAAATTCGAGTTCCTGATGTGACCCAGTTCGTCCA
TAGAATCTTGGAGCTCATCTATTGAGTCACCGATCACCTCAATGCAATCT
GCCACTGCCCCTGCGGTCTCCCT
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