CF834909

Overview
NameCF834909
Unique NameCF834909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1087 contig Csv1_Contig1087:1..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834909 vs. ExPASy Swiss-Prot
Match: Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 33/104 (31.73%), Postives = 56/104 (53.85%), Query Frame = 2 
Query:   86 RGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSI-ESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGI 394
            +G   +   E+L+EYD PIG+ P     Y  D  T K +V +   C     +S  LK+  T+TG + KGK++D+ GI  KV+I W+ +  ++    ++  + G+
Sbjct:   47 KGKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGM 149
The following BLAST results are available for this feature:
BLAST of CF834909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5161_ARATH4.457e-1131.73Uncharacterized protein At5g01610 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06F09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834909 ID=CF834909; Name=CF834909; organism=Citrus sinensis; type=EST; length=664bp
CAAACCAGACTCCATTAGGGCAGTATCCTCAACGTCAATGGGGTTTCTCT
GCCTTATTTTCCTCTTGCTGGTCTCGACCGGCGCCCGCGGCGACAATTCG
GAAACCGCATACGAAGTTCTTCAAGAATACGACTTCCCGATCGGCCTCCT
CCCAAAAAGCGTCTTGGGCTACACAATTGACCGTACCACGGGTAAGTTTT
CGGTATACTTGGAAGACACCTGTAGTTTCTCAATCGAATCATATGACCTC
AAGTACAAGCCCACGATTACGGGCGTTATAACCAAAGGCAAGATTTCTGA
TTTAAGTGGGATCAGTGTGAAAGTGCTTATTCTTTGGCTGAACATTGTGG
AAGTGACTCGTCAGGGTGATGAGCTGATGCTCTCTGTTGGAATCGCTTCT
GCTGATTTTCCTGTCAGCAGCTTTGCCGAGCGTCCGACTTGTGGGTGTGG
CTTTGACTGTTTCACTGCCACCGCCAATAACCTCCGCTTTACTCCTAATG
TACTGTCGTCGATTTCTTAAATCTTAATTATATCATTATCTACGCATCTA
ATTTCTTAATCTGCTTCCGATTGTAGTTTCTTTAGTTTTTTTTTTTTTTA
ATTTGGATCCAATAAAAGCTTGTTTTGTTGTATTGCTGAGTCTGACTATG
AGCCAAACCAATTT
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