CF834931

Overview
NameCF834931
Unique NameCF834931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10510 contig Csv1_Contig10510:402..1122. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27
Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMFQ IP ADA L K + H  DDE+GLKILK+ ++A+   G GGKVIIID+V+            +  FD+ M    N KERT +EW KL S AGF+ YK+TP FG+RSLIE YP
Sbjct:  244 GDMFQSIPSADAILLKFIIHDWDDEEGLKILKRCKDAV---GIGGKVIIIDVVVGVNHDVDEVLEDQLHFDMAMMSYFNAKERTMNEWEKLISAAGFTSYKLTPAFGVRSLIEAYP 356          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMF  IP ADA L K + H   D+D L+ILKK +EA+ ++G+ GKV IID+VIN           K L D+ M+   NGKER E EW KLF +AGF HYKI+P+ G  SLIE+YP
Sbjct:  238 GDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26
Identity = 62/116 (53.45%), Postives = 73/116 (62.93%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMFQ IP ADA L K + H  DD +GLKILKK ++A+     GGKVIIID+V+            +  FD+ M    N KERT SEW KL  DAGF  YK+TP FG+RSLIE YP
Sbjct:  245 GDMFQSIPSADAILLKSIIHDWDDVEGLKILKKCKDAVVM---GGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYFNAKERTMSEWEKLIYDAGFKSYKLTPAFGVRSLIEAYP 357          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.719e-26
Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMF  IP ADA L K + H   D+D L+ILKK +EA+ ++G+ GKV IID+VI+           K L D+ M+   NGKER E EW KLF +AGF HYKI+P+ G  SLIE+YP
Sbjct:  238 GDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.719e-26
Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMF  IP ADA L K + H   D+D L+ILKK +EA+ ++G+ GKV IID+VI+           K L D+ M+   NGKER E EW KLF +AGF HYKI+P+ G  SLIE+YP
Sbjct:  238 GDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24
Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMF+ IPPADA L K V H  D +D +KILK  ++AI     GGKVIII++V+ A          + +FD+ + +  NG ER E EW+K+FS+AG+S Y+I P+ G+RS+IEVYP
Sbjct:  250 GDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYI-MFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 364          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22
Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = 2
Query:   50 GDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            GDMF+FIP ADA + K + H  DD++ ++ILK+ +EA+    +GGKVII+DIV+N           +   D+ M +N  GKERTE EW KL  DAG+  +KIT I  ++S+IE YP
Sbjct:  234 GDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPV--KGGKVIIVDIVLNVQSEHPYTKM-RLTLDLDMMLNTGGKERTEEEWKKLIHDAGYKGHKITQITAVQSVIEAYP 346          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   29 PTLEIPLGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVYP 397
            P +E   GDMF+ +P A A + KL+ H  +DED +KILK+ R A+    +GGKVII+D+ ++           + + DI M VN  GKERT+  W K+   AGFS  KI  I  ++S+IEV+P
Sbjct:  231 PNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPK--DGGKVIIVDVALDEESDHELSST-RLILDIDMLVNTGGKERTKEVWEKIVKSAGFSGCKIRHIAAIQSVIEVFP 350          
BLAST of CF834931 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = 2
Query:   29 PTLEIPLGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXXKFL-FDILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIEVY 394
            P L+   GDMF  IP ADA L K   H  +D+D +KIL   +EA+ S   GGKVI+++IV++             +  D+++    +GKERT+ EW  L   A F+ +++ PI  + S+I  Y
Sbjct:  233 PKLDYVAGDMFTSIPNADAILLKSTLHNYEDDDCIKILNIAKEALPST--GGKVILVEIVVDTENLPLFTSARLSMGMDMML---MSGKERTKKEWEDLLRKANFTSHQVIPIMAIESIIVAY 350          
The following BLAST results are available for this feature:
BLAST of CF834931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CVMT1_OCIBA8.791e-2753.45Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
7OMT9_MEDSA2.558e-2652.59Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
EOMT1_OCIBA3.340e-2653.45Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
7OMT8_MEDSA9.719e-2651.72Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA9.719e-2651.72Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
ZRP4_MAIZE1.075e-2449.14O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
6OMT_COPJA3.822e-2246.55(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA1.775e-1942.283'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
COOMT_COPJA2.246e-1436.59Columbamine O-methyltransferase OS=Coptis japonica... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06F22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834931 ID=CF834931; Name=CF834931; organism=Citrus sinensis; type=EST; length=721bp
CTCCGCAGTTGTTGCTACCTGCCTGAGGCCGACACTTGAAATACCTTTAG
GTGACATGTTTCAGTTTATCCCTCCTGCAGATGCCTTTCTCTTCAAGTTG
GTTTTTCATGGATTAGATGATGAGGATGGGTTGAAGATACTGAAGAAACG
CAGAGAAGCAATTGCAAGCAATGGTGAGGGAGGAAAGGTCATAATAATAG
ATATTGTTATCAATGCAGAGGAAGAGGAACATGAATTAACCGAAACAAAG
TTCTTGTTTGACATTTTGATGAGCGTTAACGCTAATGGAAAAGAGAGAAC
TGAAAGTGAATGGGCAAAGCTATTCTCCGACGCTGGGTTCAGTCACTACA
AAATAACACCTATATTTGGCATGAGATCCCTCATTGAAGTCTATCCATAA
AGAATTGAGTAACAGTATTCCCGCAAGTCTCTTGTACTGCTTGATGGAAT
AGCAAAGTTTCGTTCAAGATGTATGCGTAGTAGTTGAAATGTCTCGAAAT
GACTAGAAAATGAGGTGACACACGGGTTTAAATATAGGATGAGTCACTCA
ATTAAAATGCTATAGTCTTTTGGGATGGAAACTTAAATATCCTAGACCAC
CCTTTAATATATTAAGAATAAAGGATTTGTGTGTACTATGTTATATTGCA
TTTTGTTATTGTTTCCAGCATCTGCTCTTATGTTTTATCTTTACTAATAA
AGTTACGATCTTGCTTAAAAA
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