CF834992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834992 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.448e-47 Identity = 88/113 (77.88%), Postives = 105/113 (92.92%), Query Frame = -1 Query: 197 VSELMECCRELEEGHRAWAAHKKEAAWRLRRVELQLESEKACRRREKMEEIEAKVKALRDEQRATLDRIEAEYREQIAGLRRDPEAKEQKLAEQWSAKHLRLTKFLE-QMGCR 532 +SEL+ECCRELEEGHRAWA HKKEAAWRLRR+ELQLESEK CR+REKMEEIEAK+KALR+EQ+ +++IE EYREQ+ GLRRD EAK+QKLA+QW+++H+RLTKFLE QMGCR Sbjct: 251 LSELVECCRELEEGHRAWADHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363
BLAST of CF834992 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.557e-44 Identity = 82/113 (72.57%), Postives = 102/113 (90.27%), Query Frame = -1 Query: 197 VSELMECCRELEEGHRAWAAHKKEAAWRLRRVELQLESEKACRRREKMEEIEAKVKALRDEQRATLDRIEAEYREQIAGLRRDPEAKEQKLAEQWSAKHLRLTKFLEQM-GCR 532 V+ELMECCRE+EEG RAWAAH+KEAAWR++RVE+QLE+E+ACRRRE EE EAK++ALR+EQ A ++R+EAEYRE++AGLRRD EAKEQK+AEQW+AKH RL KFL+Q+ CR Sbjct: 211 VAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQVAACR 323
BLAST of CF834992 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36 Identity = 69/110 (62.73%), Postives = 90/110 (81.82%), Query Frame = -1 Query: 203 VSELMECCRELEEGHRAWAAHKKEAAWRLRRVELQLESEKACRRREKMEEIEAKVKALRDEQRATLDRIEAEYREQIAGLRRDPEAKEQKLAEQWSAKHLRLTKFLEQMG 532 ++EL ECCRELEEG RAWAAH++EAAWRL+RVE QLE E+ RRRE EE EAK++ +R EQ A +R+E ++RE++A LRRD + KE+K+AEQW+AKH R+ KF+EQMG Sbjct: 247 LAELAECCRELEEGRRAWAAHRREAAWRLKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKMAEQWAAKHARVAKFVEQMG 356 The following BLAST results are available for this feature:
BLAST of CF834992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834992 ID=CF834992; Name=CF834992; organism=Citrus sinensis; type=EST; length=532bpback to top |