CF835009

Overview
NameCF835009
Unique NameCF835009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1735 contig Csv1_Contig1735:12..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835009 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.799e-24
Identity = 66/186 (35.48%), Postives = 99/186 (53.23%), Query Frame = 3
Query:   36 MKTSLVTKLSFLILALATKAQ---LGTSESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTNGE-CPLDVVQLSSPTERDHYVRLLPVDNST-VVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVG 545
            MKT+  T +  L+ A  +K+    +  + + P+LD  G+++++ ++Y +L   +G  GG    G   G+ CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY+ S GKW++TT G+ G PG  TL +WFK++K  V  Y    CPSVCDSC  LC+ +G
Sbjct:    1 MKTA--TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184          
BLAST of CF835009 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 67/194 (34.54%), Postives = 98/194 (50.52%), Query Frame = 3
Query:   36 MKTSLVTKLSFL----ILALATKAQLGTSES--EPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGE--CPLDVVQLSSPTERDHYVRLLPVD-NSTVVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVS-IYNLVHCPSVCDSCVKLCNKVGIF 551
            MK   +  LSF     +LA A    L  ++S   P+LD+ G K+ +   Y ++ V     GG ++   T NG   CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y+ S G++F+T GG+ G+PG +T+ +WFK+++   S  Y LV CP+VC SC   C  VGI+
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194          
The following BLAST results are available for this feature:
BLAST of CF835009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC5.799e-2435.4821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU9.258e-2234.54Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06I08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835009 ID=CF835009; Name=CF835009; organism=Citrus sinensis; type=EST; length=756bp
AGCAGAAGTTAGCTATTCTTCAAAAAATAAAGAAAATGAAGACTTCATTA
GTAACAAAACTCTCCTTCCTTATCCTTGCCTTGGCCACAAAAGCTCAGTT
GGGCACCTCAGAATCTGAACCAATCTTAGATGTCTATGGCAACAAGGTCG
AATCCAACCTCGAGTATAAGCTTCTCGAAGTCAAAAATGGCACTAGTGGT
GGATTCAGTATACATGGAGGCACAAATGGAGAGTGTCCGTTGGACGTTGT
CCAACTAAGTTCTCCTACGGAAAGGGATCATTATGTAAGATTATTACCGG
TTGACAATTCTACAGTTGTCCGGGAATCCACTGATCTCAACTTGATAGAA
CCAGTATGGACAGTTGGTAACTATAATGCTTCATTAGGAAAATGGTTTCT
AACAACCGGAGGAATCGTCGGCCACCCAGGAGCTAAAACGTTGCTAAATT
GGTTTAAGCTTAAGAAAGTTAGTGTCAGTATATACAATCTTGTTCATTGT
CCATCTGTTTGCGATTCTTGCGTTAAACTCTGTAACAAAGTCGGCATCTT
TTATGTGGACGGCGTTCGACGTCTGGTTCTGGTTCGTGATGATGATCAGC
CTCTCCGGCTGGTGTTATTTCCAGCTCCTAATCCTTCAAGATCCTCTATG
TAATGAATGACCTAGCTATATTATATATTCTGAATAATTTACCAGGCTAG
CTAGTACTCTAATCTCTATGATTAATAGTAAATTAATTAGCTAGCCTGGG
ATATAT
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