CF835049

Overview
NameCF835049
Unique NameCF835049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig151 contig Csv1_Contig151:410..1094. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.011e-80
Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 1
Query:    7 RNYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDKGLNAYSISYGSCLLFNSMFPRHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 540
            RNY IPEVDKLK KFIAGRIIPAIATSTAMATGLVCLELYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK  KHQ++SWTVWDRW +  N TLR+LL+WL++KGLNAYSIS G+ LL+NSMFPRHKER+D+KVVD+ R+VAK E+P YR+H DVVVAC D+DDND+DIP +S+YF
Sbjct:  873 RNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYF 1050          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.011e-80
Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 1
Query:    7 RNYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDKGLNAYSISYGSCLLFNSMFPRHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 540
            RNY IPEVDKLK KFIAGRIIPAIATSTAMATGLVCLELYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK  KHQ++SWTVWDRW +  N TLR+LL+WL++KGLNAYSIS G+ LL+NSMFPRHKER+D+KVVD+ R+VAK E+P YR+H DVVVAC D+DDND+DIP +S+YF
Sbjct:  873 RNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYF 1050          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.850e-75
Identity = 131/178 (73.60%), Postives = 153/178 (85.96%), Query Frame = 1
Query:    7 RNYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDKGLNAYSISYGSCLLFNSMFPRHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 540
            RNY IPEVDKLK KFIAGRIIPAIATSTAMATGLVCLELYKV+ G H +EDYRNTFANLALPLFSMAEPVPPKV KH++ SWTVWDRW ++ N TL +LLQW  DKGL AYSIS G+ LL+N+MF RHK+R+ KKVVD+ R+VAK ++P YR+H D+ VAC DED+ND+DIP +S+YF
Sbjct:  875 RNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPVEDYRNTFANLALPLFSMAEPVPPKVMKHKETSWTVWDRWSVQGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFARHKDRLTKKVVDIAREVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYF 1052          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1_CANAL (Ubiquitin-activating enzyme E1 1 (Fragment) OS=Candida albicans GN=UBA1 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.207e-35
Identity = 77/179 (43.02%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   10 NYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRWILRDNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISI 534
            NYGI   D  K KFIAG+IIPAIAT+TA+ TGLVCLELYKV+DG   +E Y+N F NLALP    +EP+     K+ +  +  +WDR+ L  + TL++LL   + ++GL    +SYG  LL+ S FP  + K+R+  K+  L+++V+K E+P + ++    + C DE+  D+++P I +
Sbjct:   25 NYGIEIADAHKTKFIAGKIIPAIATTTALVTGLVCLELYKVVDGKDDIEQYKNGFINLALPFIGFSEPIKSPEGKYNNKKFDQIWDRFELNGDITLQELLDHFEKEEGLTISMLSYGVSLLYASFFPPKKVKDRLGLKLTSLIKEVSKKEVPSHVKNLIFEICCDDEEGEDVEVPYICV 203          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 71/182 (39.01%), Postives = 113/182 (62.09%), Query Frame = 1
Query:   10 NYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 528
            NYGI   D+ K K IAG+IIPAIAT+T+   GLVCLELYKV+ G  +LE Y+N+F NLALPLFS + P+ P+  ++ D  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +     + C  +  +DI++P +
Sbjct:  872 NYGISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGHQQLESYKNSFINLALPLFSFSAPLAPECHQYYDQEWTLWDRFDVQGLQPSGEEMTLKQFLDYFKTEHKLEVIMLSQGVSMLYSVFMPASKLKERLDQPMTEIVSCVSKQKLGHHVKSLVFELCCNSDSGDDIEVPYV 1053          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.526e-31
Identity = 72/179 (40.22%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   10 NYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPV-PPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFPRHK--ERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISI 534
            NY I   D+ K KF+AG+I+PA+ TSTA+ +GLVCLEL K++DG  K+E+Y+N F NLA+ LF+ ++P+  PK+  +      +WDR+ L D  TL++L+ + Q ++GL    +S G  LL+ +  P  K  ER+  K+ +LV  + K +L P+R+H  + + C D +  D+++P I I
Sbjct:  833 NYDITPADRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFSDPIASPKMKVNGKEIDKIWDRYNLPD-CTLQELIDYFQKEEGLEVTMLSSGVSLLYANFQPPKKLAERLPLKISELVEQITKKKLEPFRKHLVLEICCDDANGEDVEVPFICI 1010          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 70/181 (38.67%), Postives = 113/181 (62.43%), Query Frame = 1
Query:    7 RNYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRWILRDNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIY 537
            +NY I   D+ K KFIAGRIIPAIAT+T++ TGLV LELYK++D    +E Y+N F NLALP F  +EP+     ++ +  +  +WDR+ ++ +  L  L++  + D+GL    +SYG  LL+ S FP  + KER++  +  LV+ V K ++P +     + +   D++  D+++P I+I+
Sbjct:  843 QNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYGVSLLYASFFPPKKLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITIH 1023          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 69/182 (37.91%), Postives = 110/182 (60.44%), Query Frame = 1
Query:   10 NYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 528
            NY IP  D+ K K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +   + + C DE   D+++P +
Sbjct:  872 NYDIPSADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYV 1053          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 69/182 (37.91%), Postives = 109/182 (59.89%), Query Frame = 1
Query:   10 NYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 528
            NY IP  D+ K K IAG+IIPAIAT+TA   GLVCLELYKV+ G   L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +   + + C DE   D+++P +
Sbjct:  872 NYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRHLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYV 1053          
BLAST of CF835049 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 69/182 (37.91%), Postives = 109/182 (59.89%), Query Frame = 1
Query:   10 NYGIPEVDKLKPKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRWILR------DNPTLRQLLQWLQ-DKGLNAYSISYGSCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQI 528
            NY IP  D+ K K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L  Y+N F NLALP F  +EP+     ++ +  WT+WDR+ ++      +  TL+Q L + + +  L    +S G  +L++   P  + KER+D+ + ++V  V+K +L  + +   + + C DE   D+++P +
Sbjct:  872 NYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLNSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYV 1053          
The following BLAST results are available for this feature:
BLAST of CF835049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBE12_WHEAT1.011e-8077.53Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE11_WHEAT1.011e-8077.53Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE13_WHEAT2.850e-7573.60Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_CANAL2.207e-3543.02Ubiquitin-activating enzyme E1 1 (Fragment) OS=Can... [more]
UBA1Y_MOUSE1.134e-3139.01Ubiquitin-like modifier-activating enzyme 1 Y OS=M... [more]
UBA1_SCHPO2.526e-3140.22Ubiquitin-activating enzyme E1 1 OS=Schizosaccharo... [more]
UBA1_YEAST2.792e-3038.67Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBA1_HUMAN2.792e-3037.91Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBA1_RABIT6.221e-3037.91Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]
UBA1_BOVIN6.221e-3037.91Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835049 ID=CF835049; Name=CF835049; organism=Citrus sinensis; type=EST; length=701bp
ACGTTAAGGAACTATGGCATCCCTGAAGTTGACAAGCTCAAGCCCAAGTT
CATTGCAGGGAGGATTATCCCAGCAATCGCAACCTCTACTGCCATGGCAA
CTGGTCTTGTGTGCTTGGAGCTTTATAAGGTTCTAGATGGTGGGCACAAA
CTGGAAGACTACCGAAATACCTTTGCCAATCTGGCCCTCCCTCTGTTCTC
GATGGCTGAGCCAGTTCCACCTAAGGTGTTCAAGCATCAGGATATGAGCT
GGACTGTGTGGGACCGGTGGATTTTGCGGGACAACCCTACACTAAGACAA
CTTCTTCAGTGGTTGCAGGACAAGGGCTTGAATGCTTACAGCATCTCCTA
TGGGAGTTGCTTGCTTTTTAACAGCATGTTTCCGAGGCACAAAGAAAGGA
TGGACAAGAAGGTGGTGGATCTGGTTAGGGATGTGGCCAAGGCAGAACTG
CCTCCATATCGACAACATTTTGATGTGGTAGTCGCATGCGTGGATGAAGA
TGACAATGATATTGATATTCCTCAAATCTCAATTTACTTTAGTTAGGTGT
TTCCGTCTAGTTAATTAGTTGACATTTATTGGTAGGATGAAAAATGAATG
ATATGCTTTGTGAACATGAGCAGATGTACTGGATTTGTTATGGTGACTAA
ATATTCTCCTATCAATCAGTAGCTTATTCAGTTCCAAAAAAAAAAAAAAA
A
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