CF835057

Overview
NameCF835057
Unique NameCF835057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:682..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 4.772e-95
Identity = 173/249 (69.48%), Postives = 190/249 (76.31%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            F   SDPRPETLAFCL  PNAGRVDS TGIKY NMFDAQVDAVHSAL +MGF+  EIVVAETGW  RGD NEVG SV+NAKAYNGNLIAHLRSM GTPLMPGK VDTYIFALYDE+LKPGP+ ER+FGLFK DLS  YDVG++KSS                         GWCVPK G ++ +LQASLD+AC  GIDC  IQPGGACFEPN V SHAA+AMN+Y+Q S K P +CDF KTAT+TSQNP
Sbjct:  204 FAYQSDPRPETLAFCLFEPNAGRVDSKTGIKYTNMFDAQVDAVHSALKSMGFEKVEIVVAETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSS------------SSQTPSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNP 440          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.460e-53
Identity = 97/242 (40.08%), Postives = 141/242 (58.26%), Query Frame = 1
Query:   25 RPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            RPETL + L  PN+G  D  T + Y +M DAQ+DA+++A+  +G+ D +I V E GWP + +P ++G  V+ A+ +N  +I    S  GTPLMP ++ +TY+F+L+DE+ KPGP  ER FGLF PD +  YD+G+ +                            WCV K G +   LQ +++YAC   +DC PIQ GGACF PN++ +HA++ MN YYQ +      CDF  T  +TS +P
Sbjct:  212 RPETLNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACG-FVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDP 452          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.104e-42
Identity = 92/254 (36.22%), Postives = 135/254 (53.15%), Query Frame = 1
Query:   37 LAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKP--------DLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXG-------WCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            L + L   ++  VD  TG+ Y NMFDAQ+DA++ AL AM FK  +++V E+GWP +G P E   + ENA AYN NLI H+    GTP  PG+ +D Y+F+L++E+ KPG   ER++G+F          D +      +S ++                         G       WC+  +  S  +LQ +LD+AC  G +DCS +QP   CFEP+TV SHA++A N YYQ S  +  +C F   +    ++P
Sbjct:  215 LEYALFESSSQVVDPATGLLYSNMFDAQLDAIYFALTAMSFKTVKVMVTESGWPSKGSPKETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDP 468          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.044e-41
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
Query:   61 NAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            N   VD+ T + Y N+FDA VDA + A++ + F +  IVV E+GWP +G P+E   +VENA  YN NLI H+ +  GTP  PG +V TYI+ LY+ED +PGP  E+++GLF  + +  Y + ++ +                           +C+ K  +    LQA+LD+AC  G +DCS +  G +C+EP+ V +H+ +A N YYQ   K   +CDF   AT+T+ +P
Sbjct:  222 NKEAVDANTLLHYTNVFDAIVDAAYFAMSYLNFTNIPIVVTESGWPSKGGPSEHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAGAGAILANDTTNQT---------------FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDP 437          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.326e-41
Identity = 87/245 (35.51%), Postives = 136/245 (55.51%), Query Frame = 1
Query:   22 PRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNE-VGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            P   +L + L   ++  +D  TG+ Y NMFDAQVDA++ AL A+ F+  +I+V ETGWP +G P E    S +NA+ YN N+I H+ +  GTP  PG++++ YIF+L++E+ K G   ER++GLF PD ++ Y +  +  S                          WC+  +  S+  L+ +LD+AC  G +DC+ IQP   CF+P+T+ SHA+F  N Y+Q +      C F       +++P
Sbjct:  210 PNNVSLDYVLFESSSEVIDPNTGLLYKNMFDAQVDALYYALTALNFRTIKIMVTETGWPTKGSPKEKAAASSDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKSN--------GFHSNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDP 446          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.483e-40
Identity = 85/232 (36.64%), Postives = 129/232 (55.60%), Query Frame = 1
Query:   58 PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            PN   VD+ T ++Y N FDA VDA + A+  + F +  ++V E+GWP +G+ NE   +++NA  YN NLI H+ +  GTP  PG +V TYI+ LY+ED K G + E+++GLF  +    Y + ++ S                           +C  + G     LQA+LD+AC  G IDCSPI+ G  C+EP+ V +HA +A + YY  +  NP  C+F   A++T+ +P
Sbjct:  230 PNKEAVDANTLVRYSNAFDAMVDATYFAMAFLNFTNIPVLVTESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAGLS-EKNWGLFNANGEPVYVLRLTNSGSVLANDTTNQT---------------YCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDP 445          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.560e-37
Identity = 82/232 (35.34%), Postives = 122/232 (52.59%), Query Frame = 1
Query:   58 PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            P+   VD  T + Y N+ DA VDA + ++  +   D  ++V E+GWP +GD  E   +++NA  YN NLI H+    GTPL P  +   YI+ L++EDL+  P  E S+GLF  + +  Y + +S S                           +C+   G+    LQA+LD+AC  G  +CS IQPG +C++PN V  HA+FA N YYQ   +   +CDF   A +T+ +P
Sbjct:  133 PSKEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTNQT---------------YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDP 349          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.011e-36
Identity = 84/227 (37.00%), Postives = 122/227 (53.74%), Query Frame = 1
Query:   73 VDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            VD  T + Y +MFDA VDA + ++ A+ F    +VV ETGWP  G  +E   +V NA+ +N NLI  + + +G P  P   ++TYI+ LY+ED + GP  ER++G+  P+ ++ Y + +S  S                          +CV KA   D +L   L++AC QG  +C+ IQPG  C+ PN V SHA+FA N YYQ        CDF  TA  T+++P
Sbjct:  229 VDPNTLLHYNSMFDAMVDAAYYSMEALNFSKIPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSSM----------------FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDP 439          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 73/145 (50.34%), Postives = 94/145 (64.83%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRS--MAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            F    +P+   L F L  PN G VD  TG  Y NM  AQ+DAV+SAL A GFK   + ++ETGWP +GD +EVG + ENAK YNGNLI  + S     TPL P   +  Y+FAL++E+LKPGP  ER++GLFKPD + AY +G +
Sbjct:  206 FAYKGNPKEVPLDFVLFQPNQGIVDPATGFHYDNMLFAQIDAVYSALAAAGFKSLRVEISETGWPSKGDDDEVGATPENAKRYNGNLIKMMMSGKKTKTPLKPNNDLSIYVFALFNENLKPGPTSERNYGLFKPDGTQAYSLGFA 350          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGI 429
            F     P+   L + L  PN G VD  T + Y NM  AQVDA++SA+  +G  D E+ ++ETGWP +GD NE+G S ENA  YNGNL+  ++   GTP      +D Y+FAL++E+LKPGP  ER++GLF PD    Y+VG+
Sbjct:  207 FAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNMLFAQVDALYSAIKTLGHTDIEVRISETGWPSKGDENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLKPGPVSERNYGLFYPDGKPVYNVGM 348          
The following BLAST results are available for this feature:
BLAST of CF835057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
E137_ARATH4.772e-9569.48Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13B_WHEAT3.460e-5340.08Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E1312_ARATH2.104e-4236.22Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E133_ARATH1.044e-4137.66Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1313_ARATH2.326e-4135.51Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E132_ARATH7.483e-4036.64Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E131_ARATH1.560e-3735.34Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E134_ARATH1.011e-3637.00Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E1311_ARATH8.014e-3450.34Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1314_ARATH1.157e-3246.48Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06J15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835057 ID=CF835057; Name=CF835057; organism=Citrus sinensis; type=EST; length=751bp
GTTTTTCGCTCCCTAAGCGACCCGAGACCCGAGACTCTTGCCTTCTGTTT
GCTTTAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAGTACA
TGAACATGTTCGACGCCCAGGTTGATGCCGTACATTCAGCCTTGAATGCA
ATGGGGTTCAAGGATGGGGAGATTGTGGTTGCAGAGACAGGGTGGCCTTA
CCGCGGAGACCCGAATGAGGTTGGACCTAGTGTTGAGAATGCCAAGGCCT
ATAACGGGAACTTGATTGCTCACCTTAGATCAATGGCTGGAACTCCATTG
ATGCCTGGAAAATCTGTGGATACATATATTTTTGCTCTCTATGATGAGGA
CTTGAAGCCTGGCCCTGCCTTTGAACGTTCATTTGGGCTCTTCAAGCCAG
ACCTTTCAGCAGCATATGATGTTGGTATTTCAAAGAGTAGCCAGACTCCA
TCAGCTCCAGTGACTCCATCAACTCCAAAAACTCCAACGACTCCATCACC
AAAACCAACAGCAGCTGGTTGGTGTGTGCCCAAGGCCGGCATCTCCGATG
CACAACTGCAGGCAAGTCTTGACTATGCCTGCAGCCAAGGCATCGATTGC
AGTCCTATCCAGCCAGGAGGTGCCTGTTTCGAACCAAATACAGTAGCATC
ACATGCTGCTTTTGCCATGAATCTCTACTATCAGACTTCTGCAAAAAATC
CATGGAACTGCGACTTTCTCAAAACGGCAACTCTCACATCCCAAAATCCC
A
back to top