CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28
Identity = 73/205 (35.61%), Postives = 116/205 (56.59%), Query Frame = 2
Query:  125 AKGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +K Q    F    L    F+L +++ AT  F  AN +G+  F   YKG L DG+++AVK ++ T  K    EFL  + ++++L H NL  L G CC +G G+  L+Y+FV N +L + L     ++  L+W TR  +  G+A+G++YLH + R  +VH ++ A  VL+ ++ NP +SD GL KL  +D      + +   GY+AP
Sbjct:  594 SKSQMEKDFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLS-TGSKQGNREFLNEIGMISALHHPNLVKLYG-CCVEG-GQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAP 795          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 66/187 (35.29%), Postives = 108/187 (57.75%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            + L E+E AT    E N++G+  +   Y+GIL DG+ VAVK +     ++++ EF   ++++  ++H+NL  L G C         L+YDFV NGNL Q +  + G    L W  R+++I G+AKG++YLH G  P +VH ++ +  +L+ R++N  +SD GL KLL  +  +   +     GY+AP
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEK-EFKVEVEVIGRVRHKNLVRLLGYCVEGAYR--MLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAP 325          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27
Identity = 71/195 (36.41%), Postives = 110/195 (56.41%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS----KGRGECFLIYDFVPNGNLLQHLDLEAGSEKV-LEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            S  F +EE+E+AT  FS+ N +G+  F   YKG+L DGSV+AVK + ++  + D  EF   ++I+++LKH NL  LRG  CS        + +L+YD++ NGNL  HL     + K+ L W  R S+I  +AKG++YLH G +P + H ++    +L+       ++D GL K   +       + +   GYLAP
Sbjct:  280 SIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGD-AEFRNEVEIISNLKHRNLVPLRG--CSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAP 471          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.036e-26
Identity = 71/195 (36.41%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  164 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV---LEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            L++  F L++++RAT  F   N +G+  F   YKG+L DG  +AVK ++  S K    EF+  + ++++L+H NL  L G CC +G+ E  L+Y+++ N +L + L    G+EK    L+W+TR  +  GIAKG++YLH + R  +VH ++ A  VL+    N  +SD GL KL  D+      + +  +GY+AP
Sbjct:  652 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKS-KQGNREFVTEIGMISALQHPNLVKLYG-CCIEGK-ELLLVYEYLENNSLARAL---FGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAP 840          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.473e-26
Identity = 70/193 (36.27%), Postives = 112/193 (58.03%), Query Frame = 2
Query:  164 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV-LEWATRISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            ++ ++F   E++ ATQ F  +N LG+  F   YKG L DG VVAVK ++  S +  +G+F+  +  ++S+ H NL  L G CC +G     L+Y+++PNG+L Q L    G + + L+W+TR  +  G+A+G+ YLH +    +VH ++ A  +L+  R  P +SD GL KL  D       + +  +GYLAP
Sbjct:  677 VKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGS-RQGKGQFVAEIVAISSVLHRNLVKLYG-CCFEGEHR-MLVYEYLPNGSLDQAL---FGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAP 863          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.536e-26
Identity = 71/195 (36.41%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  164 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV---LEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            L++  F L++++RAT  F   N +G+  F   YKG+L DG  +AVK ++  S K    EF+  + ++++L+H NL  L G CC +G+ E  L+Y+++ N +L + L    G+EK    L+W+TR  V  GIAKG++YLH + R  +VH ++ A  VL+    N  +SD GL KL  ++      + +  +GY+AP
Sbjct:  650 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKS-KQGNREFVTEIGMISALQHPNLVKLYG-CCIEGK-ELLLVYEYLENNSLARAL---FGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAP 838          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.536e-26
Identity = 75/190 (39.47%), Postives = 110/190 (57.89%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTS-CKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA-AMGYLAP 736
            F+ EE+E+AT  FSE + +GK SFS  +KGILRDG+VVAVK   K S  K    EF   L +L+ L H +L +L G C  +   E  L+Y+F+ +G+L QHL   +   +K L WA R+++    A+GI YLHG   P ++H ++ +  +LI   +N  ++D GL  L   D    + +  A  +GYL P
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYC--EDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDP 680          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.737e-26
Identity = 68/197 (34.52%), Postives = 108/197 (54.82%), Query Frame = 2
Query:  155 QEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +E L S  F L +++ AT  F+  N +G+  F A +KG+L DG VVAVK   + S KS +G  EFL  +  ++ L+H NL  L G C    R +  L Y+++ N +L   L      +  ++W TR  +  GIAKG+++LH + P   VH ++ A  +L+ +   P +SD GL +L  ++      K +  +GY+AP
Sbjct:  661 EEELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVK---QLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVE--RAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAP 852          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25
Identity = 68/192 (35.42%), Postives = 110/192 (57.29%), Query Frame = 2
Query:  164 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            ++ + F   E++ ATQ F  +N LG+  F   YKG L DG  VAVK ++  S +  +G+F+  +  +++++H NL  L G CC +G     L+Y+++PNG+L Q L  E      L+W+TR  +  G+A+G+ YLH + R  +VH ++ A  +L+  +  P +SD GL KL  D       + +  +GYLAP
Sbjct:  676 VKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGS-RQGKGQFVAEIVAISAVQHRNLVKLYG-CCYEGEHR-LLVYEYLPNGSLDQALFGEKTLH--LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAP 862          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.015e-25
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = 2
Query:  176 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVK-CIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA-AMGYLAP 736
            +F  EE+E+A   F E +++GK SFS  YKG+LRDG+ VAVK  I  +  + +  EF   L +L+ L H +L SL G C  +  GE  L+Y+F+ +G+L  HL       ++ L+W  R+++    A+GI YLHG   P ++H ++ +  +LI   +N  ++D GL  L   D    + +  A  +GYL P
Sbjct:  499 VFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYC--EECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDP 687          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
Y1534_ARATH2.175e-2835.61Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH8.266e-2835.29Probable serine/threonine-protein kinase At1g01540... [more]
Y1105_ARATH1.410e-2736.41Probable receptor-like protein kinase At1g11050 OS... [more]
Y5343_ARATH2.036e-2636.41Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH3.473e-2636.27Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH4.536e-2636.41Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE4.536e-2639.47Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
RKF1_ARATH7.737e-2634.52Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH2.251e-2535.42Probable LRR receptor-like serine/threonine-protei... [more]
ACR4_ARATH5.015e-2536.13Serine/threonine-protein kinase-like protein ACR4 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
back to top