CF835131

Overview
NameCF835131
Unique NameCF835131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13367 contig Csv1_Contig13367:240..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.959e-19
Identity = 44/109 (40.37%), Postives = 71/109 (65.14%), Query Frame = -1
Query:  321 TTYIAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPG---RERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVLR 638
            +TY+ GAK  +EC++R+   ++YS + +TD +GTY+I V  DH++++C+  L  S   DC  V+     ++ +R+ LT  NGIS+  R AN +GFMK +P+  CA+ LR
Sbjct:   47 STYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKPLPECAKALR 155          
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18
Identity = 46/112 (41.07%), Postives = 70/112 (62.50%), Query Frame = -1
Query:  303 TTYIAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVLRLYQEED 638
            T YIAGAK ++ECK   + ++  + +G TD+TGTY I + + H++ +C  VLV+SP+ DC  V   R+R+ V+LT   GIS   R AN +G+ K  P+  CA +L+    +D
Sbjct:   55 TEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVPLPVCAALLKQLDSDD 166          
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16
Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = -1
Query:  324 IAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 629
            + GA  K++C++  +    +S EG TD  G YK+ V+ DH++ +C+  +V SP+ DCK    G E++R+  +   GI +  R+AN + FMKAE + GC E L
Sbjct:   50 LEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAESVQGCKEAL 151          
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.458e-16
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = -1
Query:  303 IAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLRLYQEED 629
            + GA   V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS NGI  +  RYAN + F + EP+  C  +L+ Y   D
Sbjct:   29 VQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLKECGGILQAYDLRD 138          
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.716e-15
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = -1
Query:  300 TTYIAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAP---GRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVLRLYQEEDV 638
            +T + GA  K+EC++  +    +  E  TD  G Y I V+ D +D +C+  LV SP ++C  V+     ++ ++V LTS NG +S+ R AN++GFM+ EP+  C EVL+     DV
Sbjct:   50 STIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEPLKECPEVLKELDLYDV 165          
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = -1
Query:  315 IAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLRLY 629
            + GA   V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS  GI  +  RYAN + F + EP+  C  +L+ Y
Sbjct:   29 VEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLKECGGILQAY 134          
BLAST of CF835131 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 32/102 (31.37%), Postives = 56/102 (54.90%), Query Frame = -1
Query:  327 YIAGAKGKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEV 632
            +I GA  +++CKD+++  V ++  G T + G Y +LV  DH+++ C+  L+SS + DC  +         +    N ++  TR  N +GF K E +  CA+V
Sbjct:   33 FIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKEALPKCAQV 134          
The following BLAST results are available for this feature:
BLAST of CF835131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
OLEE1_BETVE1.959e-1940.37Olee1-like protein OS=Betula verrucosa PE=2 SV=1[more]
PSC13_MAIZE1.658e-1841.07Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE... [more]
LAT52_SOLLC1.552e-1638.24Anther-specific protein LAT52 OS=Solanum lycopersi... [more]
PHLB_PHLPR3.458e-1637.27Pollen allergen Phl p 11 OS=Phleum pratense PE=1 S... [more]
CHE1_CHEAL1.716e-1537.07Pollen allergen Che a 1 OS=Chenopodium album PE=1 ... [more]
LOLB_LOLPR4.993e-1536.79Major pollen allergen Lol p 11 OS=Lolium perenne P... [more]
ALL1_OLEEU3.956e-1231.37Major pollen allergen OS=Olea europaea PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06L15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835131 ID=CF835131; Name=CF835131; organism=Citrus sinensis; type=EST; length=659bp
CCCCCGAGTTTTTTTTTTTTTTTTAGCTGAAGTCCATAGCTTCAAAGGCT
GGAACCCATTTATTGTGAAAATAAATCAGGCATTACTAGCGATAAAACAC
ATCTCAAAGCTAGAAGCACCAGCATATAAATAAATTAATAGAGTACACGT
CCTTTAACAACAAATTAAGAATTCTCTGAACATAGAAACAACACAGCCAT
CCAGGCACTACTAATAGAAGAGACAGTATGATAGCTGGGCCAACACAAAG
CTTAAACAAATGGAAAGCGATAGAAAAAACCATGCCACACCATTCTCTAC
ACATCCTCCTCCTGATATAGCCTGAGAACCTCAGCACAGCCAGACATGGG
CTCTGCCTTCATGAAGCCCATTGAATTGGCATATCGGGTTTCAGAAGAAA
TGCCGTTGTAACTGGTCAAGATCACACGGGAACGCTCACGCCCTGGGGCA
ACTGTTTTGCAGTCATTCTGGGGGCTGCTAACGAGGACAGCATCGCAAAG
TTGATCCTGATGGTCTTCTGAAACGAGGATCTTATATGTTCCAGTTGAGT
CTGTTTTCCCTTCCCTGCTATATACTACTTGCATTGACTTCCTGTCTTTG
CATTCAACCTTCCCCTTGGCACCGGCGATGTAGGTGGTGCTGAGTTTTTT
TTTTTTTTT
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