CF835136

Overview
NameCF835136
Unique NameCF835136
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1415..2009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.660e-38
Identity = 73/118 (61.86%), Postives = 90/118 (76.27%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            DVE+ GF VPK  QVFVNVWAIGRD + W+N   F PERFLG + D +G+++EL PFGAGRRICPGLPLA++ + LML SL+ SFDWKL N     ++DM++ FGLT+ K  PLHAVP
Sbjct:  388 DVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVP 505          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37
Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVP 537
            D EI GF V K  QV VNVWAIGRD S WDNP  F PERFLG + D +G+++EL PFGAGRRICPG+PLA++ + LML SL+ SFDWKL     + ++DM++ FGLT+ K  PLHAVP
Sbjct:  387 DAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVP 504          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36
Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            DVE+ GF VPK  QV VNVWAIGRD S W+NP  F PERF+G + D KG+++EL PFG GRRICPGLPLA++ + LML SL+ SFDWKL N     ++DM++ FG+T+ +   L+A+P
Sbjct:  387 DVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIP 504          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.753e-35
Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            DV+I GF VPK  QV VNVWAIGRD S W+NP  F PERFL    D KG++FELIPFG+GRR+CPG+ +A++ +H++L SL+ SFDWKL N     N+DM + FGLT+ KA+ L AVP
Sbjct:  388 DVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVP 505          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.330e-34
Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = -3
Query:  196 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 534
            VE++G+T+P G  VFVN WAIGRD + WD+   F P+RFL S  D +G +F+LIPFGAGRRICPG+PLA RM+ +MLGSL+N+FDWK+D       +DM +K G T+ KA+PL  VP
Sbjct:  370 VELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVP 486          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 65/118 (55.08%), Postives = 83/118 (70.34%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH----NMDMEDKFGLTVQKAQPLHAVP 537
            D +  G+ +PKG QV VN WAIGRD   WDNP  F PERFL S  D KGQN+ELIPFGAGRR+C GLPL  RM+H   GSL++ FDW+L ++    +++ME+  G+T +K QPL  +P
Sbjct:  347 DTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.563e-30
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = -3
Query:  196 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 528
            I  +T+PK  Q+ VN W IGRD  TW +P TF PERFL S+ DF+G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L N     ++ +E+KFGLT+QK  PL  VP
Sbjct:  369 ILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.666e-30
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = -3
Query:  196 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 528
            I  +T+PK  Q+ VN W IGRD  TW +P TF PERFL S+ DF+G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L N     ++ +E+KFGLT+QK  PL  VP
Sbjct:  370 ILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 484          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.757e-30
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            D +  G+ VPK  QV VN WAIGRD   WD+P +F PERFLGS  D KGQ++ LIPFGAGRR+C GLPL  RM+H  LGSL+  F+W+L +     +++M+   G+T +K   L  +P
Sbjct:  385 DTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.567e-29
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -3
Query:  199 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD--MEDKFGLTVQKAQPLHAV 528
            I G+ +PK  ++ VN+WAIGRD   W+NP  FIPERFL    +  + +G +FELIPFGAGRRIC G  + I M+  +LG+LI+SFDWKL N  +D  ME+ FGL +QKA PL A+
Sbjct:  383 IDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAI 497          
The following BLAST results are available for this feature:
BLAST of CF835136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C76C2_ARATH2.660e-3861.86Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH8.557e-3761.02Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH3.252e-3657.63Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH2.753e-3559.32Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.330e-3457.267-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A1_SOLME3.975e-3455.08Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C80B1_ESCCA1.563e-3052.17(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C80B2_ESCCA2.666e-3052.17(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C76A2_SOLME7.757e-3050.85Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C75A2_SOLME6.567e-2953.91Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835136 ID=CF835136; Name=CF835136; organism=Citrus sinensis; type=EST; length=596bp
TAAATCGCATGACTTTATAGTCCACTTGAAGATTAACTCTGTTAAGTTGC
GTGTCTACATAAAACCAAATAAGAGCGCCCACACCTGAGAATGATTACAC
ACACATATAACTAACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCG
CTTTATATATTGGCTACGAACTATAGTATAGAACTAGATGGCACCAGGGA
CAGCATGAAGGGGTTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCC
ATGTCCATGTTGTGGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGA
ACCCAACATTAGATGTAACATTCTGATTGCCAATGGTAAACCAGGACAAA
TTCGTCGTCCAGCTCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAA
TCAGCATTTGACCCTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTC
CCATGTGCTTTCATCTCTGCCAATAGCCCATACATTGACAAAAACTTGTG
CACCTTTTGGCACTGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTG
CGGGGAAGTAATAAGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTT
back to top