CF835145

Overview
NameCF835145
Unique NameCF835145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length488
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13395 contig Csv1_Contig13395:634..1121. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 9.799e-39
Identity = 75/90 (83.33%), Postives = 82/90 (91.11%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 274
            ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+DVYKSAE V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKE+Q
Sbjct:  202 EDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.669e-36
Identity = 71/90 (78.89%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 274
            E ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QELGGKITR+ G +PGL TKI SF+DPDGWK VLVDNEDFLKE++
Sbjct:  193 EYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 253
            E Q  V+ELTYN+GV +Y KGNAY  +AI  DD+Y + + +    +  GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:   52 ESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTI----KAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 4.584e-12
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 253
            E Q  V+ELTYN+G TEY  G A+  +AI  DD+Y + + +    +  GG +TR+ G + G  T I    DPDG+   L+ N+
Sbjct:   52 ESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAI----KAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQNK 130          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 256
            E +  V+ELTYN+GV  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+K  L++ +D
Sbjct:   49 ETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 256
            E +  V+ELTYN+GV  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+K  L++ +D
Sbjct:   49 ETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 2
Query:   23 LELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 253
            +ELTYN+GV +Y  G AY  +AI  DD+Y + E V    +  GG +TR+ G + G +T I    DPDG+K   ++N+
Sbjct:   55 IELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAV----RASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENK 127          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.971e-11
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 256
            E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:   49 ETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.971e-11
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 256
            E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:   49 ETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CF835145 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.971e-11
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 2
Query:    5 EDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 256
            E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:   49 ETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
The following BLAST results are available for this feature:
BLAST of CF835145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
LGUL_ORYSJ9.799e-3983.33Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_BRAOG2.669e-3678.89Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_VIBCH2.198e-1443.37Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_VIBPA4.584e-1239.76Probable lactoylglutathione lyase OS=Vibrio paraha... [more]
LGUL_SALTY1.334e-1139.29Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.334e-1139.29Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_HAEIN1.334e-1141.56Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_SHIFL2.971e-1138.10Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI2.971e-1138.10Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO572.971e-1138.10Lactoylglutathione lyase OS=Escherichia coli O157:... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06L24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835145 ID=CF835145; Name=CF835145; organism=Citrus sinensis; type=EST; length=488bp
CGTGGAAGATCAGACTACTGTTCTGGAGTTAACTTATAATTATGGTGTGA
CTGAATATACCAAGGGAAATGCATATGCGCAGGTTGCTATTAGTACTGAT
GATGTATACAAAAGCGCTGAGGTTGTCAACCTGGTTACCCAAGAGCTTGG
AGGGAAGATAACTCGGCAACCCGGATCAATCCCTGGACTCAACACCAAAA
TCACCTCTTTCGTAGACCCAGATGGCTGGAAAACGGTCCTGGTTGACAAT
GAAGATTTTCTGAAGGAAATTCAGTCGGAATAATGATGTCATGGTAGGAG
GAGTTTTGCAAAACACTTGCATAAAAATAAATCCTACTACTGTACTATCT
GTATGAATAAATTACCGTGTCTGGTATTGAAAGCCACCGATATGCCTGTT
ACGATATCGGTGGTTTGCTGCTATGTGATGTGATGAATTATTAAATTGAG
ATCTACTGCTTAAATTTGGATTAAAAAAAAAAAAAAAA
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