CF835161

Overview
NameCF835161
Unique NameCF835161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF835161 vs. ExPASy Swiss-Prot
Match: 2A5I_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform OS=Arabidopsis thaliana GN=B'IOTA PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = -1 
Query:  369 NTQNHWNQAVLNLTQNVRKILCEMDEELVQACKRKLEEENSTLSVAAERRKLTWEPLESAASFQPSPDYIIAPVKPATCSVAC 617
            N QNHWNQ+VLNLT NVRK+ CEMDE L  +C  + +E+ +    AAE+RK  W  LE+AAS +P        V P   S+AC
Sbjct:  418 NAQNHWNQSVLNLTLNVRKMFCEMDEALFMSCHARFKEDEAKQCSAAEKRKEVWARLENAASMKPITGKTAVLVTPRATSIAC 500
The following BLAST results are available for this feature:
BLAST of CF835161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
2A5I_ARATH1.367e-1649.40Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06M11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835161 ID=CF835161; Name=CF835161; organism=Citrus sinensis; type=EST; length=617bp
TTTTTTTTTTTGCCATGAATGAATATTCTCATTGTATTAGGCCCTTAAAC
CGCCAGTATTAGTAGTATCTACATATTCAACCCCTTTCAAGGGATAGAAA
AATAAGCAAATCAAACAGAGCTTTAGATAAATGAAACGACATATCAATAC
ACAAGTGCCATCAGAGGAATACAAACCTATATCATTATAGCACCGCACCA
GGAGGCAACTACTCTTAAAACAACATCTTAGTGTAGATACAGAAACCCTA
TTGGATTGGCATCCTAAATCTGGCCAAATTCAACAGCCAACTTCAATTCC
TGCAATAATCAGAATCTCCAGACACATGGCTGGTTCATTTCCCATATTTG
GTGCTCAAGAAGCAATTAGCAAGCAACAGAGCATGTGGCCGGTTTCACTG
GAGCTATAATATAATCAGGCGAGGGTTGGAAACTAGCTGCACTTTCCAGG
GGTTCCCACGTCAGTTTCCGCCTCTCTGCAGCCACACTCAATGTGGAATT
TTCCTCCTCTAATTTCCTTTTGCAGGCTTGCACTAGCTCTTCATCCATTT
CACATAATATTTTCCTTACATTTTGGGTCAGGTTAAGTACTGCTTGGTTC
CAGTGATTCTGGGTGTT
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