CF835167

Overview
NameCF835167
Unique NameCF835167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13711 contig Csv1_Contig13711:832..1489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835167 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.202e-93
Identity = 169/219 (77.17%), Postives = 192/219 (87.67%), Query Frame = 1
Query:    4 ARMHIEIYKYPAWSDVVEIETWCQSEGRIGTIRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSSSSRKISKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIDWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNG-SPAITGDKEDNHQFLHLLRLSGDGSEINRGR 657
            ARMHIEIY+YPAWSDVVEIETWCQSEGRIGT RDWI+KD+AT EVIGRATSKWVMMNQDTRRLQKVSDDVR+EYLVFCP+  RL+FPEEN+ S +KISKLEDPAQ+SRLGL PRRADLDMNQHVNNV YI W+LES+P++V+ THEL+TITLDYRRECQ DDVVDSLTS E  ED   V+K+ GTNG + A T  ++D+ +FLH LR+SG G EINRGR
Sbjct:  142 ARMHIEIYRYPAWSDVVEIETWCQSEGRIGTRRDWIIKDFATDEVIGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKLEDPAQHSRLGLSPRRADLDMNQHVNNVAYIGWVLESIPKEVLYTHELETITLDYRRECQHDDVVDSLTSPEVDEDT-AVTKIIGTNGHAAAATEARDDSLKFLHFLRVSGQGLEINRGR 359          
BLAST of CF835167 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42
Identity = 98/219 (44.75%), Postives = 128/219 (58.45%), Query Frame = 1
Query:    4 ARMHIEIYKYPAWSDVVEIETWCQSEGRIGTIRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSSSSRKISKL-EDPAQYSRLGLIPRRADLDMNQHVNNVTYIDWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGR 657
            A+M + + +YP W D VE+ TW    G+ G  RDW++ D  TGE++ RA+S WVMMNQ TRRL K+ D+VR E          +  P       RK+ KL E  A   R GL PR  DLD+NQHVNNV YI W+LES P +V++T EL ++TL+YRREC ++ V++SLT+ +P           G  GS           QF HLLRL  DG EI +GR
Sbjct:  198 AKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGEILTRASSVWVMMNQKTRRLSKIPDEVRNEI-----EPHFVDSPPVIEDDDRKLPKLDEKTADSIRKGLTPRWNDLDVNQHVNNVKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLESLTAMDP---------SGGGYGS-----------QFQHLLRLE-DGGEIVKGR 390          
BLAST of CF835167 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40
Identity = 93/218 (42.66%), Postives = 132/218 (60.55%), Query Frame = 1
Query:    7 RMHIEIYKYPAWSDVVEIETWCQSEGRIGTIRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSSSSRKISKLED-PAQYSRLGLIPRRADLDMNQHVNNVTYIDWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGR 657
            RM + + +YP W DVV+++TW  + G+ G  RDW++ +  TGE++ RATS WVMMN+ TRRL K+ ++VR E   F      +      +  S+K+ KL+D  A++   GL P+ +DLD+NQHVNNV YI W+LES P  ++++HEL  +TL+YRREC +D V+ SLT+         V+               E N Q  HLLRL  DG+EI RGR
Sbjct:  195 RMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSETGEILTRATSVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVL-----AEDSQKLVKLDDSTAEHVCKGLTPKWSDLDVNQHVNNVKYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQSLTTVSDSNTENAVNV-------------GEFNCQ--HLLRLD-DGAEIVRGR 391          
BLAST of CF835167 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.673e-35
Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 1
Query:    7 RMHIEIYKYPAWSDVVEIETWCQSEGRIGTIRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPREL-RLAFPEENSSSSRKISKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIDWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGR 657
            R H+ + +YPAW D VE+E W  + G  G   D++++D  TGE++ R TS  VMMN  TRRL K+ ++VR E     P  +  +A  +E     +K++  +  A Y + GL PR  DLD+NQHVNN+ Y+DW+LE++P  + ++H + + T++YRREC  D V+ SLT+                       G  E      HLL+L G GSE+ R +
Sbjct:  168 RTHVAVERYPAWGDTVEVECWVGASGNNGRRHDFLVRDCKTGEILTRCTSLSVMMNTRTRRLSKIPEEVRGE---IGPAFIDNVAVKDEEIKKPQKLN--DSTADYIQGGLTPRWNDLDINQHVNNIKYVDWILETVPDSIFESHHISSFTIEYRRECTMDSVLQSLTTVS--------------------GGSSEAGLVCEHLLQLEG-GSEVLRAK 359          
BLAST of CF835167 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 82/221 (37.10%), Postives = 121/221 (54.75%), Query Frame = 1
Query:    7 RMHIEIYKYPAWSDVVEIETWCQSEGRIGTIRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEE---NSSSSRKISKLEDP-AQYSRLGLIPRRADLDMNQHVNNVTYIDWLLESMPQDVIDTHELQTITLDYRRECQQDDVVDSLTSAEPFEDAEPVSKLQGTNGSPAITGDKEDNHQFLHLLRLSGDGSEINRGR 657
            R H+ + +YP W D VE+E W  + G  G  RD++++D  TGE++ R TS  V+MN  TRRL  + D+VR E        +  AF +         +K+ KL D  A Y + GL PR  DLD+NQHVNN+ Y+ W+ E++P  + ++H + + TL+YRREC +D V+ SLT+            + G +    +  D        HLL+L G GSE+ R R
Sbjct:  168 RTHVAVERYPTWGDTVEVECWIGASGNNGMRRDFLVRDCKTGEILTRCTSLSVLMNTRTRRLSTIPDEVRGE--------IGPAFIDNVAVKDDEIKKLQKLNDSTADYIQGGLTPRWNDLDVNQHVNNLKYVAWVFETVPDSIFESHHISSFTLEYRRECTRDSVLRSLTT------------VSGGSSEAGLVCD--------HLLQLEG-GSEVLRAR 359          
The following BLAST results are available for this feature:
BLAST of CF835167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FATA_CORSA1.202e-9377.17Oleoyl-acyl carrier protein thioesterase, chloropl... [more]
FATB_CUPHO1.647e-4244.75Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_GOSHI1.541e-4042.66Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_CINCA5.673e-3537.16Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_UMBCA1.070e-3337.10Lauroyl-acyl carrier protein thioesterase, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06M15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835167 ID=CF835167; Name=CF835167; organism=Citrus sinensis; type=EST; length=658bp
GAGGCCCGTATGCACATTGAAATATATAAATACCCTGCTTGGAGTGATGT
GGTTGAAATTGAGACATGGTGCCAAAGTGAAGGAAGAATTGGAACTATAC
GTGATTGGATTCTGAAGGACTATGCCACTGGTGAAGTTATTGGAAGAGCA
ACGAGCAAGTGGGTGATGATGAACCAAGACACTAGGCGGCTTCAGAAAGT
TAGTGATGATGTCCGAGAAGAGTATTTAGTCTTTTGTCCTCGAGAACTCA
GGTTAGCTTTTCCAGAGGAGAATAGTAGCAGCTCAAGGAAAATTTCAAAA
CTTGAAGATCCTGCTCAGTATTCCCGGCTAGGGCTTATTCCCAGGAGAGC
TGATCTGGACATGAACCAGCATGTTAATAATGTCACCTACATTGATTGGT
TACTTGAGAGCATGCCTCAAGATGTCATCGACACCCACGAACTCCAGACT
ATCACCTTAGATTACAGACGAGAATGCCAACAGGACGATGTAGTTGATTC
CCTAACAAGTGCAGAACCATTCGAGGATGCAGAACCAGTTTCAAAACTTC
AGGGAACAAACGGCTCACCTGCCATAACTGGAGACAAAGAGGACAATCAT
CAATTTTTACACTTGCTGAGACTATCAGGTGATGGCTCGGAGATAAATCG
GGGCCGTT
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